FMO05364.5prime Sequence
227 bp (227 high quality bases) assembled on 2008-08-22
> FMO05364.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGAGTGCGACCAGG
GGAAAGGAGGCAAAGAAAAGAAAACCAACCCCCACCAGCGACGGCGGAGA
ACAGGAAAACAACAACAGAAGGCACACAACCAGCGCACCACCACCATCAT
TACCATTACCGCCACCACCCACCACAACACTTCGTCATCGTTTCGCGTTG
TGCAGAAAAGCAAGCTTTCTAGACCAT
FMO05364.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:36:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(3)neo38-RL | 2247 | CG6930-RL | 341..514 | 36..209 | 855 | 99.4 | Plus |
| l(3)neo38-RD | 4963 | CG6930-RD | 881..1054 | 36..209 | 855 | 99.4 | Plus |
| l(3)neo38-RC | 2247 | CG6930-RC | 341..514 | 36..209 | 855 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:36:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11777839..11778012 | 209..36 | 855 | 99.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:36:13 has no hits.
FMO05364.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:31:49 Download gff for
FMO05364.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(3)neo38-RC | 336..519 | 29..217 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:20:44 Download gff for
FMO05364.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(3)neo38-RB | 728..911 | 29..217 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:22:41 Download gff for
FMO05364.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(3)neo38-RC | 336..519 | 29..217 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:22:41 Download gff for
FMO05364.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11777834..11778017 | 29..217 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:31:49 Download gff for
FMO05364.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7603556..7603739 | 29..217 | 95 | | Minus |
