FMO05375.5prime Sequence
1277 bp (1048 high quality bases) assembled on 2008-08-22
> FMO05375.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGGCAACATACA
CACGACGGGTCCCAATGAGGCGTTAATTGTTTCAGGTGGCTGCTGTGGAT
CGACCAAGAAGCGCACGATTGTGGGCGGCTGGGCGTGGGCGTGGTGGCTG
GTAACCGATGTCCAGCGACTGTCCCTCAATGTGATGACCCTGAATCCGAT
GTGCGAGAATGTGGAAACGTCGCAAGGTGTTCCGCTAACGGTGACCGGAG
TGGCTCAATGCAAGATCATGAAGGCCGACGAGCTTCTAGGCACTGCCAGC
GAGCAATTCCTTGGAAAGAGCGTCAAGGAGATCAAGCAGACGATCCTGCA
AACCCTCGAAGGACATTTGAGAGCCATATTGGGAACGCTTACAGTAGAAG
AGGTGTACAAGGACCGCGACCAATTCGCTGCCTTGGTGCGCGAGGTGGCC
GCACCGGACGTGGGTCGTATGGGCATCGAGATTCTCTCGTTTACGATCAA
GGACGTCTACGATGATGTGCAGTACCTGGCCTCGTTGGGCAAGGCCCAGA
CCGCCGTGGTCAAGCGGGATGCAGATGCCGGCGTGGCGGAGGCCAATCGA
GATGCCGGTATCCGTGAGGCGGAGTGCGAAAAGAGCGCCATGGATGTGAA
ATACTCGACGGACACGAAAATCGAGGACAACACCAGGATGTACAAGCTGC
AGAAGGCCAATTTCGATCAGGAGATCAACACGGCCAACGCCGAATCGCAG
TTGGCCTACGAGCTGCAGGCAGCCAAGATCCGCCAGCGCATCCGTAACGA
GGAGATTCAGATCGAGGTGGTGGAGCGACGCAAGCAGATCGAGATTGAGT
CGCAGAAGTGCAGCGCAAGGATCGCGAGCTCACTGGCACAGTCAAGCTGC
CCGCCGAGGCCGAGGCCTTCCGCCTCCAGACCCTTGCGCAGCCAAGCAAT
GTCAGACCATCGAGGTGCCCGTGCCGAGGCGGAGCGCATACGCAGATCGG
ATCGCGAGCCCATGCATCGAGTGGTGGCAAGCGGAGGCGAACGCATGCGA
TGAAGCCCATGTTTTACAAGCAGTCCGCCATGCACATATGAATATTGTAC
CTCGAATCCCCTGCCCAAGATTGCGCCTGAGGTGGCCTGCACCACTGCCA
AACGAATGAATTGTCCTATTGGCGCCACGAATATAAACCACACATGGAAC
TCGTTGGTGCCAGTAACGCCATCGATCAACCCTGGACGGATGGGATTTGT
TCAAGGTTCTGGCTCCAGATACCAGGG
FMO05375.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:39:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Flo2-RB | 2780 | CG32593-RB | 147..1412 | 37..1277 | 5125 | 95.4 | Plus |
| Flo2-RF | 2892 | CG32593-RF | 259..1524 | 37..1277 | 5125 | 95.4 | Plus |
| Flo2-RL | 2780 | CG32593-RL | 147..1412 | 37..1277 | 5125 | 95.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:38:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 14930746..14931306 | 382..941 | 2740 | 99.6 | Plus |
| X | 23542271 | X | 14924220..14924414 | 80..274 | 975 | 100 | Plus |
| X | 23542271 | X | 14926764..14926875 | 272..383 | 560 | 100 | Plus |
| X | 23542271 | X | 14840971..14841022 | 37..88 | 260 | 100 | Plus |
| X | 23542271 | X | 14931802..14931859 | 949..1004 | 190 | 96.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:38:59 has no hits.
FMO05375.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:35:29 Download gff for
FMO05375.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Flo-2-RL | 141..1261 | 32..1136 | 97 | == | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2010-07-30 09:23:43 Download gff for
FMO05375.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Flo-2-RB | 139..1259 | 32..1136 | 97 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:10:22 Download gff for
FMO05375.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Flo2-RL | 141..1261 | 32..1136 | 97 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:10:22 Download gff for
FMO05375.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 14840965..14841012 | 32..79 | 93 | -> | Plus |
| X | 14924221..14924413 | 80..273 | 99 | -> | Plus |
| X | 14926766..14926874 | 274..382 | 100 | -> | Plus |
| X | 14930747..14931314 | 383..948 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:35:29 Download gff for
FMO05375.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 14820799..14820907 | 274..382 | 100 | -> | Plus |
| arm_X | 14734998..14735045 | 32..79 | 93 | -> | Plus |
| arm_X | 14818254..14818446 | 80..273 | 99 | -> | Plus |
| arm_X | 14824780..14825347 | 383..948 | 99 | -> | Plus |
