FMO05381.5prime Sequence
1248 bp (1067 high quality bases) assembled on 2008-08-22
> FMO05381.5prime
CTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGCCTACAAG
TGGGTTCAATCCTCGGCCTACTCCTCCCTTCCCGAGGAGGCAGTGGTGGG
CGGCAACGATGAGGACGGCGCCATGATATACGTGGGCAGGGCGGAGCACG
AGGGCGATATGTTGGTCTGTAAGGTGGTGCCGAGCAAGCAACTGGGATTC
ATTTCGCAGCGAGGAGAGGCACTGCCCAAGGACATCTTCGAGGTGCTGTG
CGGTCAGAATTTGGTATGGATCAAGTGCTACGATCATGTGATTCCGGAGA
ATGCTGTACTCTGTGGACGCACATCACTGGATCAGCCGGTGTACATTGGT
CGTGGTCATTACGAGGGTCATCTGATTATCGGCAAAATCTCCTCTGTCCA
TCGAGCTTTGTTCATCGCCTTTCGCGGTGCCGAACGTCGTCTGGATTCCT
ATGAGATTTTGGTGGAGGAGCGCAGAGTGGTTCCTGGCTGGCAGCTGCCG
CCACCACCTCCTCCACTAGAGGAGCCGGAAAAGTGTCCACTATCGCCGCC
GCCACCACCTTCTCCACCGGCAATGGCGCCGCCACTGCCGGCCAAACCAT
ATCCATATCCGGATTTGGCTGCCATGCCATTTCCTGACAGGCCTCCGGCC
TACACACCCACTCCGGATCCCATGCCACCCGTTGGAGGTGTGATGGTGAT
GCCGAGTCCAACCCCACCACCGCCGGCGGGAGGAGTGCTGGTCATGCCAC
GACCACCACCACCACCACCGCCTGCAGGTGGTGTGTTGGTCATGCCACCT
CCTCCTCCATCGTTCACTCCAGCTGAGGTGGCGCCACCGCCATCATTTGT
TCCGCAGAGGTGACCGCAGTATCCGTTCCCGTGGCACCATCGTTTACACC
CGCTTCCACCTATAATCCCTACGAGGCGGGATGCTCGTCCTACACTCCGG
CCGAGTGTGCTGCTCCTTCGGCATATGACGCTACGGCTATGGCAACAACT
TATGACGTTTGGGTATCAGCCGACCGGCTATTATTACTCTCCCGATGCCG
TGATGAGTCATGACAGCAACTGGAGCATTGCTGGTTGCCGACTACTACCG
TGGTGTTCATTTTCCTGCCAGCAATCCAGCAAGGATGTGCACATAGCCAG
GACTGAATCCTTGAACCATCGTACAATGTCGTGGCAAGCATCATGGTCAT
CTTACGCGACGTTCACTGACATGTGCGAAGAACCCTGGGGGAAACACT
FMO05381.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:54:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG44251-RA | 1860 | CG44251-RA | 118..1207 | 39..1117 | 4985 | 97.8 | Plus |
| CG44251-RB | 1796 | CG44251-RB | 57..1143 | 42..1117 | 4970 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:54:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12949072..12950087 | 1054..42 | 4735 | 98.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:54:19 has no hits.
FMO05381.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:06:36 Download gff for
FMO05381.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG44251-RA | 118..1211 | 39..1124 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:21:04 Download gff for
FMO05381.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3884-RA | 111..1204 | 39..1124 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:29:14 Download gff for
FMO05381.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG44251-RA | 118..1211 | 39..1124 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:29:14 Download gff for
FMO05381.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12948997..12950089 | 38..1124 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:06:36 Download gff for
FMO05381.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8836502..8837594 | 38..1124 | 97 | | Minus |
