Clone FMO05385 Report

Search the DGRC for FMO05385

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:53
Well:85
Vector:pMK33-CFH-BD
Associated Gene/TranscriptHsp70Bb-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO05385.5prime Sequence

1206 bp (929 high quality bases) assembled on 2008-08-22

> FMO05385.5prime
TTATACGAAGTTATCAGTCGACATGCCTGCTATTGGAATCGATCTGGGCA
CCACCTACTCCTGCGTGGGTGTCTACCAGCATGGCAAGGTTGAGATTATC
GCCAATGACCAGGGCAACCGCACCACGCCGTCCTACGTGGCTTTCACAGA
CTCGGAACGCCTCATTGGTGATCCGGCCAAGAACCAGGTGGCCATGAACC
CCAGAAACACAGTGTTTGACGCCAAGCGACTCATCGGCCGAAAATACGAC
GATCCCAAAATCGCAGAGGACATGAAGCACTGGCCTTTCAAAGTTGTAAG
CGACGGCGGAAAGCCCAAGATCGGGGTGGAGTATAAGGGTGAGTCCAAGA
GATTTGCTCCCGAGGAGATCAGTTCGATGGTGCTGACCAAGATGAAGGAG
ACGGCGGAGGCGTATCTGGGCGAGAGCATCACGGATGCAGTCATCACAGT
TCCAGCTTACTTCAACGACTCTCAGCGCCAGGCTACCAAAGACGCCGGTC
ACATCGCCGGCCTGAATGTGCTCCGCATCATCAATGAGCCCACGGCGGCA
GCATTGGCCTACGGACTGGACAAGAACCTCAAGGGTGAGCGCAATGTGCT
TATCTTCGACTTGGGCGGCGGCACCTTTCGATGTCTCCATCCTGACCATC
GACGAGGGATCTCTGTTCGAGGTGCGCTCCCACAGCCGGAGACACACACT
TGGGCGGCGAGGACTTTGACACCGGCTAGTCACCCACCTGGCGGAGGAGT
TCAAGCGCAAGTACAAGAAGGATCTGCGCTCCAACCCTCGCGCCCTACGA
CGCCTCAGAACAGCAGCTGAACGGGCCAGCGCACACTCTCCTCTAGCACG
GAGGCCACCATCGAGATCGACGCATTGTTTGAAGGCAAGACTTCTACACC
CAAGTAAGCCCTGCCAGGTTTGAGGAGCTGTGCGGCGGAACTCTTCCGCA
ACACCCTTGCAGCCTGGTGGAGAAAGCCCTCAACGAATGCCAAGATGGAA
CAAGGGTCAAATCCACGAACTCTGCTCGTCGCGGATCCACTGCGCATTCC
CAGGTGCCAAGTTTGCTGCGGGATTCTCCAGCAGAACCCTCAACCTATCA
TCACCAGACAGCATGCCTACGGACTGCTGTCAGCGTATCCCCACGCGAAC
CTAGCCGATCCGACGGCTCTGGTGGACTGTCCATTCTGGCATGGAAACCC
CTGGAA

FMO05385.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:39:25
Subject Length Description Subject Range Query Range Score Percent Strand
Hsp70Bb-RA 2347 CG31359-RA 243..1321 23..1099 4785 97.2 Plus
Hsp70Ba-RA 2324 CG31449-RA 220..1298 23..1099 4785 97.1 Plus
Hsp70Bc-RA 2386 CG6489-RA 243..1321 23..1099 4770 97.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:39:23
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 12506035..12507083 23..1073 4420 97.6 Plus
3R 32079331 3R 12466509..12467557 1073..23 4405 97.5 Minus
3R 32079331 3R 12509318..12510309 23..1018 4405 98.4 Plus
3R 32079331 3R 12502752..12503800 23..1073 4390 97.4 Plus
3R 32079331 3R 11955241..11956289 1073..23 3955 94.7 Minus
3R 32079331 3R 11958789..11959837 23..1073 3955 94.7 Plus
3R 32079331 3R 24056173..24057104 954..23 1615 79.7 Minus
3R 32079331 3R 15244372..15245118 26..776 1100 77.7 Plus
3R 32079331 3R 13045581..13046163 184..767 780 76.8 Plus
3L 28110227 3L 13974590..13974767 33..210 440 83.1 Plus
X 23542271 X 11803871..11804160 652..359 395 77.2 Minus
3R 32079331 3R 13044979..13045131 38..190 360 82.4 Plus
3L 28110227 3L 13975966..13976325 268..627 360 73.3 Plus
Blast to na_te.dros performed on 2014-11-28 20:39:24 has no hits.

FMO05385.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:35:35 Download gff for FMO05385.5prime
Subject Subject Range Query Range Percent Splice Strand
Hsp70Ba-RA 211..1311 14..1109 96   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:21:09 Download gff for FMO05385.5prime
Subject Subject Range Query Range Percent Splice Strand
Hsp70Bb-RA 234..1334 14..1109 96   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:10:34 Download gff for FMO05385.5prime
Subject Subject Range Query Range Percent Splice Strand
Hsp70Ba-RA 211..1311 14..1109 96   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:10:34 Download gff for FMO05385.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 12506026..12507129 14..1111 96 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:35:35 Download gff for FMO05385.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8331748..8332851 14..1111 96 -> Plus