FMO05385.5prime Sequence
1206 bp (929 high quality bases) assembled on 2008-08-22
> FMO05385.5prime
TTATACGAAGTTATCAGTCGACATGCCTGCTATTGGAATCGATCTGGGCA
CCACCTACTCCTGCGTGGGTGTCTACCAGCATGGCAAGGTTGAGATTATC
GCCAATGACCAGGGCAACCGCACCACGCCGTCCTACGTGGCTTTCACAGA
CTCGGAACGCCTCATTGGTGATCCGGCCAAGAACCAGGTGGCCATGAACC
CCAGAAACACAGTGTTTGACGCCAAGCGACTCATCGGCCGAAAATACGAC
GATCCCAAAATCGCAGAGGACATGAAGCACTGGCCTTTCAAAGTTGTAAG
CGACGGCGGAAAGCCCAAGATCGGGGTGGAGTATAAGGGTGAGTCCAAGA
GATTTGCTCCCGAGGAGATCAGTTCGATGGTGCTGACCAAGATGAAGGAG
ACGGCGGAGGCGTATCTGGGCGAGAGCATCACGGATGCAGTCATCACAGT
TCCAGCTTACTTCAACGACTCTCAGCGCCAGGCTACCAAAGACGCCGGTC
ACATCGCCGGCCTGAATGTGCTCCGCATCATCAATGAGCCCACGGCGGCA
GCATTGGCCTACGGACTGGACAAGAACCTCAAGGGTGAGCGCAATGTGCT
TATCTTCGACTTGGGCGGCGGCACCTTTCGATGTCTCCATCCTGACCATC
GACGAGGGATCTCTGTTCGAGGTGCGCTCCCACAGCCGGAGACACACACT
TGGGCGGCGAGGACTTTGACACCGGCTAGTCACCCACCTGGCGGAGGAGT
TCAAGCGCAAGTACAAGAAGGATCTGCGCTCCAACCCTCGCGCCCTACGA
CGCCTCAGAACAGCAGCTGAACGGGCCAGCGCACACTCTCCTCTAGCACG
GAGGCCACCATCGAGATCGACGCATTGTTTGAAGGCAAGACTTCTACACC
CAAGTAAGCCCTGCCAGGTTTGAGGAGCTGTGCGGCGGAACTCTTCCGCA
ACACCCTTGCAGCCTGGTGGAGAAAGCCCTCAACGAATGCCAAGATGGAA
CAAGGGTCAAATCCACGAACTCTGCTCGTCGCGGATCCACTGCGCATTCC
CAGGTGCCAAGTTTGCTGCGGGATTCTCCAGCAGAACCCTCAACCTATCA
TCACCAGACAGCATGCCTACGGACTGCTGTCAGCGTATCCCCACGCGAAC
CTAGCCGATCCGACGGCTCTGGTGGACTGTCCATTCTGGCATGGAAACCC
CTGGAA
FMO05385.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:39:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Hsp70Bb-RA | 2347 | CG31359-RA | 243..1321 | 23..1099 | 4785 | 97.2 | Plus |
Hsp70Ba-RA | 2324 | CG31449-RA | 220..1298 | 23..1099 | 4785 | 97.1 | Plus |
Hsp70Bc-RA | 2386 | CG6489-RA | 243..1321 | 23..1099 | 4770 | 97.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:39:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 12506035..12507083 | 23..1073 | 4420 | 97.6 | Plus |
3R | 32079331 | 3R | 12466509..12467557 | 1073..23 | 4405 | 97.5 | Minus |
3R | 32079331 | 3R | 12509318..12510309 | 23..1018 | 4405 | 98.4 | Plus |
3R | 32079331 | 3R | 12502752..12503800 | 23..1073 | 4390 | 97.4 | Plus |
3R | 32079331 | 3R | 11955241..11956289 | 1073..23 | 3955 | 94.7 | Minus |
3R | 32079331 | 3R | 11958789..11959837 | 23..1073 | 3955 | 94.7 | Plus |
3R | 32079331 | 3R | 24056173..24057104 | 954..23 | 1615 | 79.7 | Minus |
3R | 32079331 | 3R | 15244372..15245118 | 26..776 | 1100 | 77.7 | Plus |
3R | 32079331 | 3R | 13045581..13046163 | 184..767 | 780 | 76.8 | Plus |
3L | 28110227 | 3L | 13974590..13974767 | 33..210 | 440 | 83.1 | Plus |
X | 23542271 | X | 11803871..11804160 | 652..359 | 395 | 77.2 | Minus |
3R | 32079331 | 3R | 13044979..13045131 | 38..190 | 360 | 82.4 | Plus |
3L | 28110227 | 3L | 13975966..13976325 | 268..627 | 360 | 73.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:39:24 has no hits.
FMO05385.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:35:35 Download gff for
FMO05385.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hsp70Ba-RA | 211..1311 | 14..1109 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:21:09 Download gff for
FMO05385.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hsp70Bb-RA | 234..1334 | 14..1109 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:10:34 Download gff for
FMO05385.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hsp70Ba-RA | 211..1311 | 14..1109 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:10:34 Download gff for
FMO05385.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 12506026..12507129 | 14..1111 | 96 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:35:35 Download gff for
FMO05385.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 8331748..8332851 | 14..1111 | 96 | -> | Plus |