FMO05395.5prime Sequence
1219 bp (1021 high quality bases) assembled on 2008-08-22
> FMO05395.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGGACGCGAGCAGA
TACAAGGTCGACGGCGAGAACGACAATTGCGGGGCGACCTTGGCCGCTGT
AAATCTGAATGTCCTTCCCGATGAGATACTGGAGTTCATATTCACCTACC
TGCCACCCTACGGCGACTTGGAGCACTGCAGCCTGGTGTGCAAGCGATGG
CACGCCATTGTGAAGAACCTTGTGCGTCGTTCCAGACACAATCTCGAGAA
GGGCCTCATCGACTTTCGACTGCGCTGGGAGGTGTTTTCCCAGCAGACAG
TCAATGGCGGGGCAGGAGCACTATTATCCTTTATTGCCGGAAGATTTGCT
CATTCGGCTGTGCGGCAAGACAACTCCATGTACGTATTCGGCGGTGGATC
CTCGTCGGACACCACCTTCAACGATCTGTGGCGCTTTGATTTGACGCACA
TGCGGTGGGCGCGGCCAGTGGCCACAGGAACCTATCCCTCGCCCAAGGGC
AGTGCATCAATGGTGGCGTGGCGGAACCAGCTGATACTCTTTGGCGGATG
GCGATACCCCTCGCTACATCCGCCCTACCAACCATGGTGCTTATTTGACG
AGCTGCACTACTACGATCTTGGAAAGAACCGTTGGCTGCTGCGAAGCTCC
CTATCTTCCCCACCACCGATGGCTGGACACTCGGCCACGGTACATGGCGA
TCGGATGGTAGTTTTTGGTGGTTACCAGATCAAAGACGATTTCAATGTGA
ACTCGAACGACACATGGGTACTGGATCTGCCGGAGCAGCGCTGGTGGCAG
CCGCTCTTTGTGGGCAACACGCGACCCAGTCCGCGATACGGACAAATACA
GTGGAGTTGGGAAGGAACCATCTGCTGATCGTGGGAGGATGTGGCGGTGC
CAATCGCGTGTACACTGATGCCTGGCTGCTGGACATGACCAGGGATGTTG
GAGCTGGAAGTCTATTGCTGTGCGCAACAAGCGCTTTGGAGCCGTCCAAT
GTGTGCAATCCCGGTTGCAAGGTTAACACTACCTGGTGTCGTGGTCCATC
CCCCACATGCCGCAGACTCCATGATGAACCAAGCAAGTCTCCGTCCGTGG
AGGCGTGACCCTCCGCCGCTATTCCTCTTCAAGAACTCAGGATACGAACC
ACTCGATCGCATAGTGAGTGATGCTGACCTGCCAAATCGCAGAAACACTC
TCGCTCCCTGGTATTTGCT
FMO05395.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6758-RA | 2392 | CG6758-RA | 216..1328 | 36..1132 | 5010 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22175376..22176202 | 217..1038 | 3870 | 99.3 | Plus |
| 2R | 25286936 | 2R | 22175137..22175317 | 36..216 | 905 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:29:03 has no hits.
FMO05395.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:43:27 Download gff for
FMO05395.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6758-RA | 213..1261 | 29..1071 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:21:07 Download gff for
FMO05395.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6758-RA | 229..1277 | 29..1071 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:02:59 Download gff for
FMO05395.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6758-RA | 213..1261 | 29..1071 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:02:59 Download gff for
FMO05395.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22175137..22175317 | 36..216 | 100 | -> | Plus |
| 2R | 22175376..22176240 | 217..1071 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:43:27 Download gff for
FMO05395.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18062642..18062822 | 36..216 | 100 | -> | Plus |
| arm_2R | 18062881..18063745 | 217..1071 | 98 | | Plus |
