FMO05401.5prime Sequence
227 bp (227 high quality bases) assembled on 2008-08-25
> FMO05401.5prime
CAGTCGACATGATTATTCCAATCCGTTGTTTCACCTGCGGCAAGGTCATT
GGCAACAAGTGGGAGTCGTATTTGGGTCTCCTGCAAGCGGAATACACCGA
AGGAGATGCCCTGGATGCTTTGGGTCTAAAGAGGTACTGCTGCCGTCGCA
TGCTCCTGGGCCACGTGGATCTTATCGAAAAACTGCTCAACTATGCTCCT
CTGGAGAAGGCAAGCTTTCTAGACCAT
FMO05401.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:47:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Rpb10-RA | 405 | CG13628-RA | 108..308 | 9..209 | 1005 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:47:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 24717795..24717901 | 103..209 | 535 | 100 | Plus |
3R | 32079331 | 3R | 24717618..24717712 | 9..103 | 475 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:47:12 has no hits.
FMO05401.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:39:45 Download gff for
FMO05401.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Rpb10-RA | 108..312 | 9..213 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:29:40 Download gff for
FMO05401.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Rpb10-RA | 65..269 | 9..213 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:29:04 Download gff for
FMO05401.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Rpb10-RA | 108..312 | 9..213 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:29:04 Download gff for
FMO05401.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 24717618..24717712 | 9..103 | 100 | -> | Plus |
3R | 24717796..24717905 | 104..213 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:39:45 Download gff for
FMO05401.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 20543340..20543434 | 9..103 | 100 | -> | Plus |
arm_3R | 20543518..20543627 | 104..213 | 98 | | Plus |