FMO05403.5prime Sequence
347 bp (347 high quality bases) assembled on 2008-08-25
> FMO05403.5prime
CAGTCGACATGTTGCTGAAACAGTTGCCCCAGGCTGTTCAGCAGATACGC
TGCATCTCATCGGCCACGACGGCGGTTACCAGGCTGCATCGCTCGGTTTA
CTGCCGGCTATATCCCACAGTTGTGGTGCAACCCGATGGATCCACGATAA
ACATCCGCTATCACGAGCCCAGGAAGATTATCAAGCTTCCCTTGGATCTG
AGCACCTTAACCGATGCGGAGCGCAGAGCGAGATTGGAGGCCCGCAAGCC
GCGCAAGAAGGTCAAGATCATGGAGGAGGTGGAGGACAACTTCAACGCCA
AGAAGTACATGAAGTACATCAAAAAGAAGGCAAGCTTTCTAGACCAT
FMO05403.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:57:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL55-RA | 456 | CG14283-RA | 88..408 | 9..329 | 1605 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:57:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 19094642..19094818 | 185..9 | 885 | 100 | Minus |
| 3R | 32079331 | 3R | 19094442..19094587 | 329..184 | 730 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 21:57:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Doc3-element | 4740 | Doc3-element DOC3 4740bp | 1159..1206 | 281..328 | 105 | 68.8 | Plus |
FMO05403.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:46:02 Download gff for
FMO05403.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL55-RA | 77..409 | 1..335 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:29:43 Download gff for
FMO05403.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL55-RA | 72..404 | 1..335 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:45:50 Download gff for
FMO05403.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL55-RA | 80..412 | 1..335 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:45:50 Download gff for
FMO05403.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 19094642..19094826 | 1..185 | 97 | | Minus |
| 3R | 19094438..19094585 | 186..335 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:46:02 Download gff for
FMO05403.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14920160..14920307 | 186..335 | 98 | <- | Minus |
| arm_3R | 14920364..14920548 | 1..185 | 97 | | Minus |
