FMO05404.5prime Sequence
365 bp (365 high quality bases) assembled on 2008-08-25
> FMO05404.5prime
CAGTCGACATGCCGGCCAAAAAGAGAACTGCCGCGTCGACCAGCAAAAAT
AGCGATTCGCCATTAAGTCCGCACACAGACGATCCAGCGTACAAAGAAAA
AAGAAAGAAAAACAATGAGGCTGTTCAGCGCACACGCGAAAAGACCAAGA
AATCGGCCGAGGAACGTAAGAAACGCATCGATGATTTGAGGAAGCAAAAC
GATGCTCTTAAGGTTCAGATCGAGACGAGTGAAAAACATATATCTACGCT
TAGAGATCTGATCATTCAGGGTGAGAAAACGGAGGACGGCCATCGAATCA
TCCAGGAGATTCTCGCTGAACCAGATCCCGATCCCAAGGACAATGACGCA
AGCTTTCTAGACCAT
FMO05404.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:10:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6272-RB | 614 | CG6272-RB | 77..415 | 9..347 | 1695 | 100 | Plus |
CG6272-RA | 543 | CG6272-RA | 77..415 | 9..347 | 1695 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:10:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 11097645..11097874 | 347..118 | 1150 | 100 | Minus |
3L | 28110227 | 3L | 11097999..11098110 | 120..9 | 560 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:10:02 has no hits.
FMO05404.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:46 Download gff for
FMO05404.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6272-RA | 77..418 | 9..351 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:29:45 Download gff for
FMO05404.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6272-RA | 77..418 | 9..351 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:41:47 Download gff for
FMO05404.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6272-RA | 77..418 | 9..351 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:41:47 Download gff for
FMO05404.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 11097642..11097872 | 120..351 | 99 | <- | Minus |
3L | 11098000..11098110 | 9..119 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:46 Download gff for
FMO05404.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 11090742..11090972 | 120..351 | 99 | <- | Minus |
arm_3L | 11091100..11091210 | 9..119 | 100 | | Minus |