FMO05408.5prime Sequence
446 bp (446 high quality bases) assembled on 2008-08-25
> FMO05408.5prime
CAGTCGACATGGGCGAACCAAGGAGCCAACCACCCGTGGAGCGTCCACCG
ACCGCGGAAACCTTTCTGCCCCTCAGCCGCGTGCGAACGATCATGAAGAG
CTCCATGGACACGGGCTTGATCACCAACGAGGTGCTCTTCCTGATGACCA
AGTGCACGGAGCTATTCGTTCGCCATTTGGCGGGCGCGGCATACACGGAG
GAATTCGGCCAGCGACCGGGCGAAGCGCTCAAGTACGAGCATCTCTCCCA
GGTGGTCAATAAGAACAAGAATCTGGAGTTTCTGCTGCAGATCGTGCCGC
AAAAGATCCGTGTACACCAGTTCCAGGAGATGCTGCGGCTAAATCGCTCC
GCCGGCAGCGACGACGACGATGACGACGACGATGATGACGATGAAGAAGA
GTCCGAATCGGAATCGGAGTCTGATGAAGCAAGCTTTCTAGACCAT
FMO05408.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:02:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Chrac-16-RB | 737 | CG15736-RB | 89..508 | 9..428 | 2100 | 100 | Plus |
| Chrac-16-RA | 685 | CG15736-RA | 89..508 | 9..428 | 2100 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:02:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 12017454..12017873 | 428..9 | 2100 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 20:02:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ZAM | 8435 | ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). | 7909..7980 | 216..147 | 111 | 65.3 | Minus |
FMO05408.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:25:36 Download gff for
FMO05408.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Chrac-16-RA | 89..508 | 9..428 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:29:50 Download gff for
FMO05408.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Chrac-16-RA | 84..503 | 9..428 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:49:28 Download gff for
FMO05408.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Chrac-16-RA | 89..508 | 9..428 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:49:28 Download gff for
FMO05408.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 12017454..12017873 | 9..428 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:25:36 Download gff for
FMO05408.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11911487..11911906 | 9..428 | 100 | | Minus |
