FMO05410.5prime Sequence
476 bp (476 high quality bases) assembled on 2008-08-25
> FMO05410.5prime
CAGTCGACATGGACAAGAAATCCTCGCCGGTGCGACGACAAAAGCGGCAG
GCGAAGGTGATCGAGGAGAACTTCTGGGACTGCAGCGTCTGCACATATAG
AAACTCGGCGGAGGCCTTCAAGTGTCGCATGTGCGACGTGCGGAAAGGAA
CCTCCACGCGAAAGCCACGCCTGAACTCAGCGCTAGTCGCCCAGCAGGCC
GCCACTTTGCCAGGAGCCAGTGTCAACATGCCCAACGGGAAGTCCGCCTC
CGGATCACGGCATGGCAGTGGGCACGACCGGCAGAGGCACAAGCGGTATC
CGGCACGGTTGAAAAACGTGGACCGATCGACGGCACAGACGCGAGAGGTG
ACGGTCAACTCGGTGACCGTGTTCATCACAGAGTACAAGGCCAAGCCGGT
GAGCAGCCGACGCGAATCCAGTGAGCAGAGCTTCAGCGAGAGCAACGACA
GCCGGAGTGCAAGCTTTCTAGACCAT
FMO05410.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:09:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RYBP-RB | 2242 | CG12190-RB | 521..970 | 9..458 | 2250 | 100 | Plus |
| RYBP-RA | 2064 | CG12190-RA | 343..792 | 9..458 | 2250 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:09:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22671628..22671940 | 146..458 | 1565 | 100 | Plus |
| 2R | 25286936 | 2R | 22671107..22671246 | 9..148 | 700 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:09:43 has no hits.
FMO05410.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:34 Download gff for
FMO05410.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RYBP-RA | 356..810 | 3..458 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:29:37 Download gff for
FMO05410.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12190-RA | 351..805 | 3..458 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:41:37 Download gff for
FMO05410.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RYBP-RA | 338..792 | 3..458 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:41:37 Download gff for
FMO05410.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22671102..22671245 | 3..147 | 97 | -> | Plus |
| 2R | 22671630..22671940 | 148..458 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:34 Download gff for
FMO05410.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18558607..18558750 | 3..147 | 97 | -> | Plus |
| arm_2R | 18559135..18559445 | 148..458 | 100 | | Plus |
