FMO05413.5prime Sequence
527 bp (527 high quality bases) assembled on 2008-08-25
> FMO05413.5prime
CAGTCGACATGGCTTCCGATGGCGAGGACATCAGTGTTACACCCGCAGAA
TCCGTAACATCGGCCACGGACACCGAGGAGGAGGATATAGACTCGCCACT
AATGCAGTCCGAACTGCATTCCGACGAGGAGCAACCGGACGTGGAGGAGG
TTCCTCTGACGACGGAGGAATCGGAGATGGATGAGCTGATAAAGCAGCTG
GAGGACTACTCGCCCACCATACCAGACGCCCTCACCATGCACATCTTGAA
AACGGCTGGCTTCTGCACAGTGGACCCCAAGATAGTGCGCCTCGTCTCGG
TGTCCGCGCAGAAGTTCATCTCGGATATTGCCAACGACGCACTGCAGCAC
TGCAAGACGCGCACCACGAACATCCAGCATTCCAGCGGACACAGTTCCAG
CAAGGACAAGAAAAACCCCAAGGACAGGAAGTACACGCTGGCCATGGAGG
ACCTGGTGCCGGCACTCGCGGACCACGGCATCACCATGCGCAAGCCGCAG
TATTTCGTTGCAAGCTTTCTAGACCAT
FMO05413.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:48:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Taf10-RA | 664 | CG2859-RA | 92..592 | 9..509 | 2505 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:48:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 2768285..2768540 | 254..509 | 1280 | 100 | Plus |
2L | 23513712 | 2L | 2767981..2768227 | 9..255 | 1235 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 19:48:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
invader3 | 5484 | invader3 INVADER3 5484bp | 4126..4175 | 89..138 | 106 | 68 | Plus |
FMO05413.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:45:53 Download gff for
FMO05413.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Taf10-RA | 92..599 | 9..518 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:29:58 Download gff for
FMO05413.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Taf10-RA | 70..577 | 9..518 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:20:46 Download gff for
FMO05413.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Taf10-RA | 92..599 | 9..518 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:20:46 Download gff for
FMO05413.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 2768286..2768547 | 255..518 | 98 | | Plus |
2L | 2767981..2768226 | 9..254 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:45:53 Download gff for
FMO05413.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 2767981..2768226 | 9..254 | 100 | -> | Plus |
arm_2L | 2768286..2768547 | 255..518 | 98 | | Plus |