FMO05415.5prime Sequence
593 bp (593 high quality bases) assembled on 2008-08-25
> FMO05415.5prime
CAGTCGACATGATGGGCACTATGTCGCTGCGCCAGCCAGAGAATTGGCTA
TACGAGATTTGGCAGAAGGGCTACGACAGCCCCTGCTATGTGATGGTGCC
TAATGCAAAAGATCTGGTCAAGTCGCATCTCATGATAGCGGTGCGCGAGG
AGGTGGAAGTGCTAAAAGAGCGCATCTCCGAGCTGATGGACAAGATCAAC
AAGCTGGAGCTCGAGAACAGCATTCTCAAGTCGAACATCCCGCAGGAGAC
ACTGCAGCAGCTGCAGTTGCAGCTACAACTCGCCGCACCGCCGGCCACGC
CCGCCATTCAAGCGGCACCGGCGGTACAAAGTGTCGTTGCTCCAGCTGCC
GCGGGTCAGGCAGTTCAGCAGCAGGCCGCTGGAGCGGTAGCGGTAACGGG
TGTGGCCACCAGTCCAGCGTCCGCGGTGGTACCCACGAGCATTCCCAACG
GCAGCGCCGAGAACGGCAGCAGTGCAGTCGAGTCAGCAGCGGTATCGGTG
GAGCAGCAGGTGCAGCAGGTGACATCAGCAGCGGCAGCAGCAGCATCGGT
AGTCACAGCCAATGGTCCCATGTCCGCAAGCTTTCTAGACCAT
FMO05415.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:25:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| bun-RP | 5139 | CG42281-RP | 3391..3957 | 9..575 | 2835 | 100 | Plus |
| bun-RC | 1754 | CG5461-RC | 567..1133 | 9..575 | 2835 | 100 | Plus |
| bun-RO | 3490 | CG42281-RO | 807..1271 | 111..575 | 2325 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:25:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 12457759..12458223 | 575..111 | 2325 | 100 | Minus |
| 2L | 23513712 | 2L | 12460588..12460690 | 111..9 | 515 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:25:40 has no hits.
FMO05415.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:23:01 Download gff for
FMO05415.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bun-RC | 559..1136 | 2..579 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:30:00 Download gff for
FMO05415.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bun-RI | 540..1117 | 2..579 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:11:34 Download gff for
FMO05415.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bun-RC | 559..1136 | 2..579 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:11:34 Download gff for
FMO05415.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 12460589..12460698 | 2..110 | 96 | | Minus |
| 2L | 12457755..12458223 | 111..579 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:23:01 Download gff for
FMO05415.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 12457755..12458223 | 111..579 | 99 | <- | Minus |
| arm_2L | 12460589..12460698 | 2..110 | 96 | | Minus |
