FMO05416.5prime Sequence
605 bp (605 high quality bases) assembled on 2008-08-25
> FMO05416.5prime
CAGTCGACATGGGCCGCAAAAAAATTCAAATATCACGCATCACCGATGAA
CGCAATCGGCAGGTGACCTTCAACAAGCGCAAGTTCGGCGTGATGAAGAA
GGCCTACGAGCTGTCCGTGCTCTGCGACTGCGAGATCGCCCTGATCATCT
TCTCGTCGAGCAACAAGCTGTACCAGTACGCCAGCACCGACATGGATCGC
GTCCTGCTCAAGTACACCGAGTACAACGAGCCCCACGAGTCCCTCACCAA
CAAGAACATCATCGAGAAGGAGAACAAGAACGGCGTGATGTCGCCGGACT
CGCCCGAAGCCGAAACGGACTACACACTCACTCCGCGAACGGAGGCCAAG
TACAACAAGATCGACGAGGAGTTCCAGAACATGATGCAGCGCAACCAGAT
GGCCATCGGCGGTGCGGGTGCCCCTCGCCAGCTTCCAAACAGCAGCTACA
CGCTGCCCGTTTCTGTTCCGGTGCCGGGATCTTACGGCGACAACCTGCTG
CAGGCCAGTCCACAGATGTCCCACACCAACATCAGCCCCCGTCCATCGAG
TTCGGAGACGGATTCAGGTGGGATGTCCCTGATAAGTGCAAGCTTTCTAG
ACCAT
FMO05416.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:05:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mef2-RG | 5240 | CG1429-RG | 2460..3037 | 8..585 | 2890 | 100 | Plus |
Mef2-RC | 5854 | CG1429-RC | 1056..1633 | 8..585 | 2890 | 100 | Plus |
Mef2-RD | 3690 | CG1429-RD | 1439..2016 | 8..585 | 2890 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:05:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 9919427..9919749 | 587..265 | 1615 | 100 | Minus |
2R | 25286936 | 2R | 9920519..9920725 | 266..60 | 1035 | 100 | Minus |
2R | 25286936 | 2R | 9921606..9921664 | 66..8 | 295 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:05:48 has no hits.
FMO05416.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:26:40 Download gff for
FMO05416.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mef2-RD | 1432..2016 | 1..585 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:30:02 Download gff for
FMO05416.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mef2-RE | 1018..1604 | 1..587 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:51:11 Download gff for
FMO05416.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mef2-RD | 1432..2016 | 1..585 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:51:11 Download gff for
FMO05416.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 9919427..9919747 | 267..587 | 100 | <- | Minus |
2R | 9920519..9920722 | 63..266 | 100 | <- | Minus |
2R | 9921610..9921671 | 1..62 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:26:40 Download gff for
FMO05416.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 5806932..5807252 | 267..587 | 100 | <- | Minus |
arm_2R | 5808024..5808227 | 63..266 | 100 | <- | Minus |
arm_2R | 5809115..5809176 | 1..62 | 95 | | Minus |