FMO05417.5prime Sequence
611 bp (611 high quality bases) assembled on 2008-08-25
> FMO05417.5prime
CAGTCGACATGGTTCTGGAAATGGAGATGTCCAAGACCTATCAGTACCGC
AAGGTGATGAAGCCCATGCTGGAGCGTAAGCGCCGTGCCAGGATTAACAA
GTGCCTGGACGAGCTCAAGGACATCATGGTGGAGTGCCTGACCCAGGAGG
GCGAGCACATCACCCGGCTGGAGAAGGCCGACATCCTGGAGCTGACCGTG
GAGCACATGAAGAAGCTGCGTGCCCAGAAGCAGCTGCGTCTGTCCAGCGT
CACCGGTGGAGTGTCTCCGAGTGCCGATCCCAAGCTTAGCATCGCTGAGA
GTTTCCGTGCTGGCTACGTTCATGCTGCCAATGAAGTGTCCAAAACCTTG
GCCGCTGTACCCGGAGTGAGTGTGGATCTCGGCACCCAGCTGATGAGTCA
CCTTGGCCATCGTCTCAACTACCTGCAAGTGGTGGTTCCCTCGCTGCCCA
TTGGAGTGCCTCTTCAAGCTCCAGTAGAGGATCAAGCTATGGTCACTCCA
CCTCCCTCGGAATGCGACAGCTTGGAGAGCGGAGCCTGCAGCCCGGCGCC
CAGCGAGGCCAGCTCCACCTCTGGCCCCATGTGGCGTCCCTGGGCAAGCT
TTCTAGACCAT
FMO05417.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:41:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| E(spl)mbeta-HLH-RA | 978 | CG14548-RA | 131..715 | 9..593 | 2925 | 100 | Plus |
| E(spl)m3-HLH-RA | 1305 | CG8346-RA | 204..397 | 21..214 | 640 | 88.7 | Plus |
| E(spl)mgamma-HLH-RA | 911 | CG8333-RA | 114..289 | 24..199 | 460 | 84.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:41:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26005309..26005893 | 593..9 | 2925 | 100 | Minus |
| 3R | 32079331 | 3R | 26022026..26022219 | 21..214 | 640 | 88.7 | Plus |
| 3R | 32079331 | 3R | 25999964..26000139 | 24..199 | 460 | 84.1 | Plus |
| 3R | 32079331 | 3R | 26037178..26037291 | 24..137 | 405 | 90.4 | Plus |
| 3R | 32079331 | 3R | 26040357..26040416 | 51..110 | 180 | 86.7 | Plus |
Blast to na_te.dros performed 2014-11-28 19:41:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| baggins | 5453 | baggins BAGGINS 5453bp | 2455..2521 | 72..140 | 106 | 65.7 | Plus |
FMO05417.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:38:10 Download gff for
FMO05417.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| E(spl)mbeta-HLH-RA | 124..724 | 1..600 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:30:03 Download gff for
FMO05417.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| HLHmbeta-RA | 124..724 | 1..600 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:24:21 Download gff for
FMO05417.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| E(spl)mbeta-HLH-RA | 124..724 | 1..600 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:24:21 Download gff for
FMO05417.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26005300..26005900 | 1..600 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:38:10 Download gff for
FMO05417.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21831022..21831622 | 1..600 | 98 | | Minus |
