FMO05421.5prime Sequence
637 bp (637 high quality bases) assembled on 2008-08-25
> FMO05421.5prime
TGCCAATATGATACCCTACGACACCATCGGATTGTATGAACAGCCAAAGC
CGCGCTTCATCTTCAAGATGCCTCGTGTGGTCCCGGACCAGAAGTCCAAG
TTCGAGAGCGACGAACTTTTCCGGAGGCTCAGTCGGGAGAGCGAGGTTCG
GTACACGGGCTATCGGGAACGAAGCATCGAGGAGCGGCAGGTGCGCTTCA
TGAACGGATGTCGCGAAGGACACACGGAGGCCAGCTTCGTGGCATCGGGC
ACCAATCTGCAGCTGGTGTTCAACGCCAACCAGAACCCGTACCTGCACGA
CAAGGAGTGCGACTTTGACAAGGAGCACGGCAAGGTGCACATCAAGTCCT
ACTTTATCATGAACGGGGTTTGTGTCCGGTTCCGTGGATGGATAGACCTG
GAACGACTGGACGGAGTTGGCTGTCTGGAGTATGACGAGCGGCGCGCCAT
GCACGAGGACGCCATTCTGCGGGATCAGATCGATCGCTACAACCAGCGAC
TGCGTGAGTTCGAGGACACTAAGCGCGCCTACCGTGACAATCGACAGGAC
GAGATGGAGGCAGTGCGACGGGGCGTGGCCTCCGGAGGCATTGGCGTTGG
CGCCAGCATGTGGCGTCGTGCAAGCTTTCTAGACCAT
FMO05421.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:58:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bgb-RB | 1242 | CG7959-RB | 305..923 | 1..619 | 3095 | 100 | Plus |
| Bgb-RA | 1242 | CG7959-RA | 305..923 | 1..619 | 3095 | 100 | Plus |
| Bro-RA | 744 | CG7960-RA | 110..575 | 33..498 | 470 | 75 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:58:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1640015..1640633 | 1..619 | 3095 | 100 | Plus |
| 3L | 28110227 | 3L | 1647978..1648443 | 33..498 | 425 | 72.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:58:57 has no hits.
FMO05421.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:40:33 Download gff for
FMO05421.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bgb-RA | 305..928 | 1..627 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:30:06 Download gff for
FMO05421.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bgb-RA | 314..937 | 1..627 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:55:19 Download gff for
FMO05421.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bgb-RA | 305..928 | 1..627 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:55:19 Download gff for
FMO05421.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1640015..1640638 | 1..627 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:40:33 Download gff for
FMO05421.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1640015..1640638 | 1..627 | 99 | | Plus |
