FMO05424.5prime Sequence
698 bp (698 high quality bases) assembled on 2008-08-25
> FMO05424.5prime
CAGTCGACATGCAGTTTCACTTTAAAGTCGCGGACGCTGAAAGGGACAGG
GATAATGTGGCTGCGACCAGCAATGCTGCCGCCAATCCGCACGCAGCCCT
GCAGCCGCAACAGCCCGTTGCCCTGGTGGAGCCCAAGGATGCACAACATG
AGATACGATTGCAGAATATCGTGGCCACCTTCTCGGTGAACTGTGAACTG
GACCTCAAGGCAATCAACTCGCGTACGAGGAACTCGGAGTACTCGCCCAA
GCGCTTTCGTGGCGTCATCATGCGAATGCACTCGCCCAGGTGCACAGCGC
TAATCTTTCGAACGGGCAAGGTCATCTGCACGGGTGCACGAAACGAGATT
GAGGCGGACATTGGATCGCGAAAGTTCGCACGCATCCTGCAGAAGCTGGG
ATTCCCCGTAAAGTTCATGGAATACAAGCTGCAGAATATTGTGGCCACCG
TTGATCTGCGCTTCCCCATCCGCCTGGAGAACCTCAACCACGTGCACGGG
CAGTTTAGTTCCTACGAACCGGAGATGTTTCCAGGCCTAATCTATCGCAT
GGTCAAGCCGCGCATCGTTCTCCTGATCTTCGTCAACGGAAAGGTTGTAT
TTACGGGCGCCAAGTCGCGCAAGGACATTATGGACTGCCTGGAGGCGATA
TCACCTATTTTACTAAGTTTTCGCAAGACGGCAAGCTTTCTAGACCAT
FMO05424.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:40:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Trf-RA | 983 | CG7562-RA | 77..748 | 9..680 | 3360 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:40:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8073197..8073713 | 164..680 | 2585 | 100 | Plus |
| 2L | 23513712 | 2L | 8072971..8073126 | 9..164 | 780 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:40:03 has no hits.
FMO05424.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:36:59 Download gff for
FMO05424.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Trf-RA | 72..753 | 1..688 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:29:56 Download gff for
FMO05424.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Trf-RA | 70..751 | 1..688 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:14 Download gff for
FMO05424.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Trf-RA | 72..753 | 1..688 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:14 Download gff for
FMO05424.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8072966..8073125 | 1..163 | 97 | -> | Plus |
| 2L | 8073197..8073718 | 164..688 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:36:59 Download gff for
FMO05424.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8072966..8073125 | 1..163 | 97 | -> | Plus |
| arm_2L | 8073197..8073718 | 164..688 | 99 | | Plus |
