FMO05425.5prime Sequence
698 bp (698 high quality bases) assembled on 2008-08-25
> FMO05425.5prime
CAGTCGACATGGTCATGGAGATGTCCAAGACGTATCAGTACCGCAAGGTG
ATGAAGCCGCTGCTGGAGCGCAAACGGCGAGCCAGGATCAACAAGTGTCT
GGACGATCTCAAGGATCTGATGGTGGAGTGCCTGCAGCAGGAGGGCGAGC
ACGTCACCCGGCTGGAGAAGGCGGATATCCTGGAGTTGACCGTGGATCAC
ATGAGGAAACTCAAGCAGCGGGGTGGTCTTTCGCTGCAGGGAGTAGTGGC
TGGTGTTGGCAGCCCACCCACCTCAACCAGTACCGCCCACGTGGAGTCCT
TTCGCTCCGGCTATGTGCATGCTGCCGATCAGATTACCCAGGTCCTGCTG
CAGACACAGCAAACCGATGAGATTGGGCGCAAGATAATGAAATTCCTATC
GACGCGACTAATTGAGCTGCAGACGCAGTTGCTCCAGCAGCAGCAGCAAC
AGCAACAACACCAGCAGCAGCAAATACCGCAATCATCAGGCCGCCTAGCC
TTCCCGCTGCTGGGAGGATATGGACCGGCAGCCGCCGCTGCCGCCATTAG
TTACAGCTCCTTCCTGACCAGCAAGGACGAACTGATCGATGTGACATCCG
TCGATGGCAATGCGTTATCCGAGACGGCGTCGGTTAGCTCGCAGGAGTCC
GGCGCCTCTGAGCCCGTCTGGAGGCCCTGGGCAAGCTTTCTAGACCAT
FMO05425.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:39:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| E(spl)m3-HLH-RA | 1305 | CG8346-RA | 197..869 | 8..680 | 3365 | 100 | Plus |
| E(spl)mbeta-HLH-RA | 978 | CG14548-RA | 143..336 | 15..208 | 640 | 88.7 | Plus |
| E(spl)mgamma-HLH-RA | 911 | CG8333-RA | 114..280 | 18..184 | 430 | 83.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:39:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26022019..26022691 | 8..680 | 3365 | 100 | Plus |
| 3R | 32079331 | 3R | 26005688..26005881 | 208..15 | 640 | 88.7 | Minus |
| 3R | 32079331 | 3R | 25999964..26000130 | 18..184 | 430 | 83.8 | Plus |
| 3R | 32079331 | 3R | 26037178..26037291 | 18..131 | 375 | 88.6 | Plus |
| 3R | 32079331 | 3R | 25997756..25997928 | 21..193 | 235 | 75.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:39:03 has no hits.
FMO05425.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:15:36 Download gff for
FMO05425.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| E(spl)m3-HLH-RA | 189..874 | 1..688 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:30:11 Download gff for
FMO05425.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| HLHm3-RA | 297..982 | 1..688 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:31:43 Download gff for
FMO05425.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| E(spl)m3-HLH-RA | 189..874 | 1..688 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:31:43 Download gff for
FMO05425.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26022011..26022690 | 1..679 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:15:36 Download gff for
FMO05425.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21847733..21848412 | 1..679 | 99 | -> | Plus |
