FMO05427.5prime Sequence
727 bp (727 high quality bases) assembled on 2008-08-25
> FMO05427.5prime
CAGTCGACATGGTAGCACCAGCAAACACAATCCAAACTAATGCGAATTCC
GACGACGATGAGGGAGTGCGGTCGGCGCCTACCTCCATGCTGGTGCTGGA
CGCCAAGCGGAAGAGCGCCTTCTTGCCGTACCGCCCCCAGTCCACCGTGC
TGACCAACTTGCAGCGCGGCAATACGGAGGCCACCTTTTGCCCCGTCGAA
GTTTCGCTCTCCTTTCACGAACGCGCTGGCCAAGGCGAGATCACGGAGGA
GCAGGTGGCAGCGGAAAGAGCGCGTCAGCAGAACATTGATTACAAGGATG
CACATGGTTTCACAGCCTTACATTGGGCAGCCTCCTACGGTCAACTGGTT
TCCGTGCAGCTCCTCGTCGCGGCTGGTGCCAATGTGAACACTATGGCTCC
AGATTTGATTAGTCCTCTACTCCTAGCTGCCGCCGGTGGGCATAACGAGA
TCGTCCGCTTCTTGCTGGAACACGGCGCTGATTCGGGCCACATGGACATC
GTTGGAAACACGGCGCTTATGTACGCAGCGGCCGGCAATCATCCGCATAC
TTGCAACGAGCTCCTGGCCAAAGACCTGGATCTAAGTGCCACCAACGAGG
ACGGAGACACGGCCTACTCGCTGGCCGTAGAGCATGGGGCTCATCTGGCG
CATCGCTACTGGAGCAGTACATGACGGCCATAATCACAGCGGGAGCCTTC
GGTAGTATTGCAAGCTTTCTAGACCAT
FMO05427.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:05:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5846-RB | 952 | CG5846-RB | 171..872 | 9..709 | 3455 | 99.6 | Plus |
| CG5846-RA | 845 | CG5846-RA | 27..728 | 9..709 | 3455 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:05:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9956292..9956993 | 709..9 | 3430 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:05:51 has no hits.
FMO05427.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:50:55 Download gff for
FMO05427.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5846-RA | 27..733 | 9..717 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:30:14 Download gff for
FMO05427.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5846-RA | 815..1521 | 9..717 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:49:39 Download gff for
FMO05427.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5846-RA | 27..733 | 9..717 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:49:39 Download gff for
FMO05427.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9956287..9956993 | 9..717 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:50:55 Download gff for
FMO05427.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9956287..9956993 | 9..717 | 99 | | Minus |
