Clone FMO05429 Report

Search the DGRC for FMO05429

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:54
Well:29
Vector:pMK33-CFH-BD
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO05429.5prime Sequence

785 bp (785 high quality bases) assembled on 2008-08-25

> FMO05429.5prime
CAGTCGACATGTCCATCCTGAAGGAGCTGAATGTCCAGGAGTACGAGCCG
CGCGTGGTCAACCAACTGCTGGAGTTCACCTTCCGCTATGTAACCTGCAT
TCTGGACGACGCCAAGGTGTACGCCAACCATGCGCGCAAGAAGACCATCG
ACTTGGACGACGTGCGTCTGGCCACCGAGGTTACGCTGGACAAGAGCTTC
ACCGGGCCGTTGGAGCGCCACGTTCTAGCCAAGGTGGCCGACGTGCGCAA
CAGCATGCCCCTGCCACCCATTAAGCCGCACTGCGGTCTCCGACTGCCGC
CCGACCGCTACTGTCTCACCGGCGTCAACTACAAACTGCGGGCCACTAAT
CAGCCCAAGAAAATGACCAAGTCGGCGGTGGAGGGCCGTCCACTGAAGAC
CGTCGTTAAGCCCGTCTCCAGCGCCAATGGTCCGAAGAGGCCACACTCCG
TGGTGGCCAAGCAGCAGGTGGTGACCATTCCCAAGCCCGTCATCAAGTTT
ACCACCACTACGACAACGAAAACGGTGGGCAGCTCCGGCGGATCTGGGGG
CGGCGGTGGTCAGGAGGTTAAGAGCGAGAGCACCGGCGCCGGCGGAGATC
TCAAGATGGAGGTGGACAGCGATGCGGCGGCCGTGGGCAGCATCGCTGGC
GCATCCGGTTCGGGAGCATGAAGTGCCAGCGGAGGAGGAGGAGGAGGAGG
ATCATCTGGCGTTGGAGTGGCCGTCAAGCGGGAACGTGAGGAGGAGGAGT
TTGAGTTTGTGACCAACGCAAGCTTTCTAGACCAT

FMO05429.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:05:58
Subject Length Description Subject Range Query Range Score Percent Strand
e(y)1-RA 1124 CG6474-RA 173..932 8..767 3785 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:05:56
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 17842474..17843156 85..767 3400 99.9 Plus
X 23542271 X 17842333..17842410 8..85 390 100 Plus
Blast to na_te.dros performed 2014-11-28 22:05:57
Subject Length Description Subject Range Query Range Score Percent Strand
Doc4-element 2791 Doc4-element DOC4 2791bp 1457..1487 717..687 110 83.9 Minus

FMO05429.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:50:59 Download gff for FMO05429.5prime
Subject Subject Range Query Range Percent Splice Strand
e(y)1-RA 165..936 1..773 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:30:17 Download gff for FMO05429.5prime
Subject Subject Range Query Range Percent Splice Strand
e(y)1-RA 151..922 1..773 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:49:42 Download gff for FMO05429.5prime
Subject Subject Range Query Range Percent Splice Strand
e(y)1-RA 165..936 1..773 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:49:42 Download gff for FMO05429.5prime
Subject Subject Range Query Range Percent Splice Strand
X 17842325..17842409 1..84 96 -> Plus
X 17842474..17843160 85..773 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:50:59 Download gff for FMO05429.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 17736358..17736442 1..84 96 -> Plus
arm_X 17736507..17737193 85..773 99   Plus