FMO05432.5prime Sequence
797 bp (797 high quality bases) assembled on 2008-08-25
> FMO05432.5prime
CAGTCGACATGCTGGACATCAAGTCCTCCGCCGATTACTTGTCACGCTCC
ACGGGCAGCTTCAGCAACTTCTCGATGCTCTTCGCAGATTCCTCGTACAA
ATCGTCGTGGGGCTCCCACAGTTCGACACAATCGCAAGGTTACAGCTCGA
ACGCCCTGGGCATCAAACATGATCCGCACTCACAACTACGGCAACCTGAT
CCATATCAAATGTTCGGACCCACCAGCAGCAGACTGGCCAGCTCAGGCTC
TGGCCAAATCCAGCTGTGGCAGTTCCTTCTCGAGCTGCTCTCGGACTCCA
ATAACGCCAGCTGCATCACCTGGGAGGGCACCAACGGCGAGTTTAAGCTA
ACCGATCCCGACGAGGTCGCCCGCCGCTGGGGCGAGAGGAAGTCCAAGCC
CAACATGAACTACGATAAGCTCAGTCGCGCCTTGAGGTACTACTACGACA
AAAATATAATGACCAAGGTGCACGGCAAGCGGTATGCGTACAAATTCGAT
TTCCAAGGCCTGGCAGCTGCTACTCAGCCGGCGGCCAGCGATCCCACCTA
CAAATACCAGAGCGACTTGTTCATGACACCATATCACCACAGCGCCAAGC
TCAGCTCGTTCATGAGTCCGCATCATGGCATGACCTCATCCTCGGCCTCG
ATCTTCCCGTCGGCCGCCTCGTGGGGCAACTGGGGCAGTCCGGCCACGAA
TCTCTACCAGCCGCACTCGATGAGCCACGTGACCCCCTCCCACGTAGCGC
CCCACCTGAGCAGCTATCCCCACTACGCAGCAAGCTTTCTAGACCAT
FMO05432.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:43:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ets65A-RB | 2177 | CG7018-RB | 654..1424 | 9..779 | 3855 | 100 | Plus |
| Ets65A-RE | 4190 | CG7018-RE | 1695..2386 | 88..779 | 3460 | 100 | Plus |
| Ets65A-RD | 4190 | CG7018-RD | 1695..2386 | 88..779 | 3460 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:43:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 6121492..6121702 | 435..645 | 1055 | 100 | Plus |
| 3L | 28110227 | 3L | 6118956..6119150 | 244..438 | 975 | 100 | Plus |
| 3L | 28110227 | 3L | 6121975..6122109 | 645..779 | 675 | 100 | Plus |
| 3L | 28110227 | 3L | 6112120..6112198 | 9..87 | 395 | 100 | Plus |
| 3L | 28110227 | 3L | 6114292..6114353 | 137..198 | 310 | 100 | Plus |
| 3L | 28110227 | 3L | 6112368..6112423 | 85..140 | 280 | 100 | Plus |
| 2L | 23513712 | 2L | 547993..548162 | 421..252 | 280 | 77.6 | Minus |
| 3L | 28110227 | 3L | 6115954..6116003 | 198..247 | 250 | 100 | Plus |
| 2L | 23513712 | 2L | 547825..547902 | 512..435 | 240 | 87.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:43:49 has no hits.
FMO05432.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:39:12 Download gff for
FMO05432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ets65A-RB | 646..1424 | 1..779 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:30:22 Download gff for
FMO05432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ets65A-RB | 898..1676 | 1..779 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:25:13 Download gff for
FMO05432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ets65A-RB | 646..1424 | 1..779 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:25:13 Download gff for
FMO05432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 6121494..6121702 | 437..645 | 100 | -> | Plus |
| 3L | 6121976..6122109 | 646..779 | 100 | | Plus |
| 3L | 6112112..6112198 | 1..87 | 95 | -> | Plus |
| 3L | 6112371..6112421 | 88..138 | 100 | -> | Plus |
| 3L | 6114294..6114353 | 139..198 | 100 | -> | Plus |
| 3L | 6115955..6116002 | 199..246 | 100 | -> | Plus |
| 3L | 6118959..6119148 | 247..436 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:12 Download gff for
FMO05432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 6114594..6114802 | 437..645 | 100 | -> | Plus |
| arm_3L | 6115076..6115209 | 646..779 | 100 | | Plus |
| arm_3L | 6105212..6105298 | 1..87 | 95 | -> | Plus |
| arm_3L | 6105471..6105521 | 88..138 | 100 | -> | Plus |
| arm_3L | 6107394..6107453 | 139..198 | 100 | -> | Plus |
| arm_3L | 6109055..6109102 | 199..246 | 100 | -> | Plus |
| arm_3L | 6112059..6112248 | 247..436 | 100 | -> | Plus |
