FMO05435.5prime Sequence
800 bp (800 high quality bases) assembled on 2008-08-25
> FMO05435.5prime
CAGTCGACATGAACCTCGCCGACGTTTGCCGTATTTGCGCCAACAAAATT
ATGGGCCACCAGCGAGATCGCAACATATTCATTCACATGCGGGGAAAATA
TTTGGGTCAACTGAAGCTAATCACGGGAGTGGAGCTGACAAGAAACCAGG
GGCTGCCGGAGATTGTTTGCGAGCGCTGCTTCTCCGAGCTGGACCTGGCC
ACCAAGTTCCGCGAGCGGTGCATCTTCTCGCAAAAGTACCTGCTGGATAT
CATAAAGAAGACCAGTGATCAAAGCACTGTTCACGTTGAGCTTAGTTCCG
AGCCGCTGGACGAGCAACTGATCGATGCGGATCAATTGGAGACGCACTAC
GATGACGACCAGTACGTTTGTTATCAAGGCACGAAAGAGGAACACCAAGA
CCTAGAGGAAATCGAGCTGGATGACGACCCCTCTGCCGCTGTGATAGCGG
CAGCAGAGGCGGCAGCAGAAGCGGCGCAGCAGGAGGATCTACAGGAGCAG
GAAATGGAGCGGGCCGCCAAGAGGCGCAGTAACTTCTTTATCTGCGACGA
GTGTGGAACCCTGTTCCACGATGCGTTCCTGTACACCGAGCATTTAAATG
GGCACCAGAACCGGCGGGATATGAACCAGTTCTTCCCCTGCCCTGAGTGC
CCACAGACTTTTAACAAGAAGGCGCTTCTCAAGCAGCATCGCACCCAGGT
TCATTTAATTAACCGCAGGTTCCAGTGCACCATCTGCCACGAGGCTTTCG
CGTCTCTGGGCGCTAAGTTGCGGCACGACAAGGCAAGCTTTCTAGACCAT
FMO05435.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:13:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14667-RB | 1260 | CG14667-RB | 70..842 | 9..781 | 3865 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:13:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5375276..5375925 | 133..782 | 3250 | 100 | Plus |
| 3R | 32079331 | 3R | 5375091..5375216 | 9..134 | 630 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:13:23 has no hits.
FMO05435.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:14:14 Download gff for
FMO05435.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14667-RA | 22..799 | 9..787 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:30:09 Download gff for
FMO05435.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14667-RA | 22..799 | 9..787 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:03:40 Download gff for
FMO05435.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14667-RB | 70..845 | 9..784 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:03:40 Download gff for
FMO05435.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5375091..5375216 | 9..134 | 100 | -> | Plus |
| 3R | 5375278..5375929 | 135..787 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:14:14 Download gff for
FMO05435.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1200813..1200938 | 9..134 | 100 | -> | Plus |
| arm_3R | 1201000..1201651 | 135..787 | 99 | | Plus |
