FMO05436.5prime Sequence
803 bp (803 high quality bases) assembled on 2008-08-25
> FMO05436.5prime
CAGTCGACATGGGCTGTCGGAGCCGGCGGGCGGACGGAGCTGCCTCACCA
ACGCCGTCGGACAGCTCCGACTCGGACATCTCACTGGGCACCCACTCGCC
GGTGCCGAGCAGCCTGCAGCTGCAGCATAGTCCGGGCAGCACCTCCAACG
GCGCCAACGACCGCGAGGAGAGCCTGAGCGTGGACGACGACAAGCCGCGG
GATCTGAGCGGATCGCTGCCACTGCCCCTCTCGCTGCCCCTGCCGCTGGC
CTCGCCCACCCACACGCCGCCCCAACTGCCGCCGGGCTACGGGGGCGGGG
CGGGCGCAGGACCCGGAGGACCTCTGACCGGTCCGGGCTGTCTGCCACCC
TTCAAGCTGGACGCGGCCACCAGTCTGTTCAGCGCCGGCTGTTACCTGCA
GAGCTTCAGCAACCTGAAGGAGATGTCGCAGCAGTTTCCCATCCAGCCGA
TTGTCCTGCGTCCGCATCCGCAGCTGCCGCAGTCGCTGGCACTGAACGGC
GCATCCGGCGGACCGCCACTGCATCACCCGGCCTACGCGGCTGCCTACAG
TGTGGAGTGCGTTCCAGGTGGTCATGGACCACCGCATCCGCCGCCGAAGC
TGAGGATAAACTCCCCGGAGAAGCTCAACTCCACGGCAGTGGCGGCGGCA
GCATCCGTCGGAGGAGGAGGTGGCAACCAACACCATGAGCCCACCACGAC
CGGCTACCATCACAGTGGCCAACTGATGCTGCATCGGCCCTTCTCCACGT
CGCCGGAGCTGAAGCACAGTGCTCCCGAGATCACAGCAAGCTTTCTAGAC
CAT
FMO05436.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:05:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Optix-RC | 2668 | CG18455-RC | 1360..2136 | 9..785 | 3855 | 99.7 | Plus |
| Optix-RB | 1470 | CG18455-RB | 162..938 | 9..785 | 3855 | 99.7 | Plus |
| Optix-RA | 2358 | CG18455-RA | 1050..1826 | 9..785 | 3855 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:05:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8041221..8041997 | 9..785 | 3855 | 99.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:05:10 has no hits.
FMO05436.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:50:31 Download gff for
FMO05436.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Optix-RA | 1040..1826 | 1..785 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:30:10 Download gff for
FMO05436.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Optix-RB | 69..855 | 1..785 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:49:18 Download gff for
FMO05436.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Optix-RA | 1040..1826 | 1..785 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:49:18 Download gff for
FMO05436.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8041211..8041997 | 1..785 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:50:31 Download gff for
FMO05436.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3928716..3929502 | 1..785 | 99 | | Plus |
