FMO05438.5prime Sequence
854 bp (854 high quality bases) assembled on 2008-08-25
> FMO05438.5prime
CAGTCGACATGGTTTTTATCCGAGATCCCTGTGGCATCGCCTGCTTGGTA
GTCACCTACGGAGCAGTTCTGTACGCGGACTATGTGGTCATCCGTTGGAT
CATTCTGACCACCATGCCGGGCAGCCTCTGGATGTCCTTCCATGTGGTGC
TCTTTAACACCGTCGTCTTCCTGTTGGCCATGTCCCACTCCAAGGCCGTG
TTCTCCGATCCAGGCACTGTGCCGCTGCCCGCCAATCGTCTGGACTTCTC
CGACCTGCACACGACCAACAAAAACAATCCTCCGCCCGGTAATGGACACA
GCAGCGAATGGACCGTGTGCACCCGCTGCGAAACGTATAGGCCGCCACGC
GCCCATCATTGTCGCATCTGCAAGCGGTGCATCCGGCGCATGGATCACCA
CTGCCCCTGGATCAACAACTGTGTGGGCGAGCGCAATCAGAAGTACTTCC
TGCAGTTCCTCATCTACGTGGCGCTGCTGTCGCTCTACTCCATTGCCCTT
ATCGTCGGTTCCTGGGTGTGGCCCTGCGAGGAGTGCAGCCAGAACGTGAT
CGAAACCCAGTTGCGAATGATTCACTCGGTTATCCTTATGCTGGTGTCGG
CGCTGTTCGGCCTGTTCGTTACGGCCATCATGGTGGACCAGCTGCATGCG
ATTCTGTACGACGAGACGGCCGTGGAGGCGATACAGCAGAAGGGCACCTA
TCGTCCAAATCGGCGCAAGTACCAGCTGCTGGCGGATGTGTTCGGACGCG
GACATCCGGCGCTGTGGCTGCTGCCCTGCACCAGTCTCAATCATGCCTCC
CGCTACCATGATACGCCTCTACTGAGCCACGAGGTCGCAAGCTTTCTAAA
CCAT
FMO05438.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:33:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dnz1-RA | 1949 | CG6627-RA | 367..1194 | 9..836 | 4140 | 100 | Plus |
| CG8314-RA | 1280 | CG8314-RA | 536..637 | 347..448 | 180 | 78.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:33:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10855654..10856101 | 569..122 | 2240 | 100 | Minus |
| 2L | 23513712 | 2L | 10855190..10855457 | 836..569 | 1340 | 100 | Minus |
| 2L | 23513712 | 2L | 10856163..10856278 | 124..9 | 580 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:33:44 has no hits.
FMO05438.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:37:16 Download gff for
FMO05438.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dnz1-RA | 357..1194 | 1..836 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:30:29 Download gff for
FMO05438.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dnz1-RA | 382..1219 | 1..836 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:26:30 Download gff for
FMO05438.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dnz1-RA | 357..1194 | 1..836 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:26:30 Download gff for
FMO05438.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10855190..10855457 | 569..836 | 100 | <- | Minus |
| 2L | 10855655..10856098 | 125..568 | 100 | <- | Minus |
| 2L | 10856163..10856282 | 1..124 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:37:16 Download gff for
FMO05438.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10855190..10855457 | 569..836 | 100 | <- | Minus |
| arm_2L | 10855655..10856098 | 125..568 | 100 | <- | Minus |
| arm_2L | 10856163..10856282 | 1..124 | 96 | | Minus |
