FMO05457.5prime Sequence
1026 bp (1026 high quality bases) assembled on 2008-08-25
> FMO05457.5prime
CAGTCGACATGACTGAAGTACAATATAAAGAGGCCGAGATCTTGGCTCTA
CTACCACATACATATGAGGATGAGGAGCTGTCCTTAAACACAGAAGAGCT
ACAGTTCGAGGAACTCAATGAGAGAAGCCAGCACCAGCAAGGCGGATCTC
CGTCCTTCGTCTGCAGACGCTGTCCAGCGCTATTCCTCACCAGGGAGGAG
TTGGCCGCCCATCGGCCCACACACCGATACCAGGGTGGACAGCAAACGCC
CGCGTCGGAGCATGCCTGCGACGCGTGTGGAAGGGTCTTCCAAAAGCACA
ACGCCCTTGTGGATCACATGAATGCCCACAACGACGTGCGGAACTATCCG
TGTCCCGAGTGTCCGGCGCGCTTTGTGCAGCGCAGCAATAGGGAGTGTCA
CCTGAAGAACGTTCATCGGAAGGTGTACCTGCACTCCTGTCCAGAACCGG
GCTGCAAGAAGCGTTTCCAGCAGAGGCGGGAGTGTGATCAGCATGTGAAG
ACGGTCCACCAGAATGAGCGGAACCTCGTTTGCGACACCTGCAGTGCCCG
CTTCAGCCATCCTGTAAATTATAGAAAGCACTTGGCGTCCCATGGCTCCG
CGAAGAGCTACGGCTGTCCGATCTGTGGAAAGCTCTTCGGACGGCCCGAA
AACAGGGATGTTCATCTCTTCGTCCATAGTATCTGTAAGGCCTATATATG
CTCCGTCTGCGGAGCAGATTATATGCGGCGCAATCAGTTGATACGCCATG
GCTTGGCCAGTGGCCACCACAACGATCCGATTGTCCGCCAAAAACCGCAG
TTTAGTCCGGCCCTTGCTGCGAAGAATCGAAGCCAGAGAAGCGCAATAGA
CGAGTCCCAGGACGAGGAGCTCCAATGGCTGAAAGGAGTTGACGCCTCGA
CAGCGCAAGATACTGGAGAATTCACAATTTCGAACACCGGCAAGATGACT
GCCATAATTGCAGAGGACGAAACGAAGCGAGTATCATGCAAGCTTTCTAG
ACATTCGTTTGGCGCGCGGGCCAGTA
FMO05457.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:06:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11398-RD | 3018 | CG11398-RD | 79..1057 | 9..982 | 4740 | 99.3 | Plus |
| CG11398-RA | 1487 | CG11398-RA | 79..1057 | 9..982 | 4740 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:06:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1213962..1214793 | 972..144 | 3980 | 99.4 | Minus |
| X | 23542271 | X | 1214942..1215078 | 145..9 | 685 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:06:32 has no hits.
FMO05457.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:51:20 Download gff for
FMO05457.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11398-RA | 74..1064 | 1..991 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:30:55 Download gff for
FMO05457.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11398-RA | 49..1039 | 1..991 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:49:55 Download gff for
FMO05457.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11398-RA | 74..1064 | 1..991 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:49:55 Download gff for
FMO05457.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1213943..1214792 | 145..991 | 98 | <- | Minus |
| X | 1214943..1215083 | 1..144 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:51:20 Download gff for
FMO05457.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1107976..1108825 | 145..991 | 98 | <- | Minus |
| arm_X | 1108976..1109116 | 1..144 | 97 | | Minus |
