FMO05469.5prime Sequence
1223 bp (1053 high quality bases) assembled on 2008-08-25
> FMO05469.5prime
CAGTCGACATGTACAAGCGCAAAACCGCGAGTATTGTTAAAAGAGACAGC
TCCGCAGCGGGCACCACCTCCTCGGCTATGATGATGAAGGTGGATTCGGC
TGAGACTTCGGTCCGGTCGCAGAGCTACGAGTCTACACCCGTTAGCATGG
ACACATCACCGGATCCTCCAACGCCAATCAAGTCTCCGTCGAATTCACAA
TCGCAATCGCAGCCTGGACAACAGCGCTCCGTGGGCTCACTGGTCCTGCT
CACACAGAAGTTTGTGGATCTCGTGAAGGCCAACGAAGGATCCATCGACC
TGAAAGCGGCAACCAAAATCTTGGACGTACAGAAGCGCCGAATATACGAT
ATTACCAATGTTTTAGAGGGCATTGGACTAATTGATAAGGGCAGACACTG
CTCCCTAGTGCGCTGGCGCGGAGGGGGCTTTAACAATGCCAAGGACCAAG
AGAACTACGACCTGGCACGTAGCCGGACTAATCATTTGAAAATGTTGGAG
GATGACCTAGACAGGCAACTGGAGTATGCACAGCGCAATCTGCGCTACGT
TATGCAGGATCCCTCGAATAGGTCGTATGCATATGTGACACGTGATGATC
TGCTGGACATCTTTGGAGATGATTCCGTATTCACAATACCTAATTATGAC
GAGGAAGTAGATATCAAGCGTAATCATTACGAGCTGGCCGTGTCGCTGGA
CAATGGCAGCGCAATTGACATTCGCCTGGTGACGAACCAAGGAAAGAGTA
CTACAAATCCGCACGATGTGGATGGGTTCTTTGACTATCACCGTCTGGAC
ACGCCCTCACCCTCGACGTCGTCGCACTCCAGCGAGGATGGTAACGCTCC
AGCATGCGCGGGGAACGTGATCACCGACGAGCACGGTACTCGTGCATCCC
GGGATGAAAGATGAGATGAAACTTTGGAGACGAGCTGACGGCAAGATATC
TTCCAAATTATCTGTCCGGTCATCGCTGCGCGATTTTATCCCGATGATCG
AATCTAGAAACCCGCCGCTGCTGCAGCTGATCCTCCGCAGGAGACTTCAA
CTTGGTTAAAAGCGACGAGTATTTGCAGCTGTTTGATGTTCATGCTCGCA
AGCTTCATGACATTCGTTGCCGCGCGGCCCAGTAGGCTAACCTAACTAAC
TATCCTATCAACATAGCCTAGGAATTCTGGCTGAGACATAATCTGTGAAT
CTCCCAAATTATAAAAGCGCCTC
FMO05469.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:01:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| E2f2-RB | 2002 | CG1071-RB | 706..1815 | 8..1097 | 5060 | 98.2 | Plus |
| E2f2-RA | 1485 | CG1071-RA | 189..1298 | 8..1097 | 5060 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:01:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 21155743..21156044 | 309..8 | 1510 | 100 | Minus |
| 2L | 23513712 | 2L | 21155107..21155366 | 677..418 | 1300 | 100 | Minus |
| 2L | 23513712 | 2L | 21154655..21154985 | 999..678 | 1205 | 97.3 | Minus |
| 2L | 23513712 | 2L | 21155572..21155682 | 418..308 | 555 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:01:47 has no hits.
FMO05469.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:48:26 Download gff for
FMO05469.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| E2f2-RA | 184..1304 | 1..1104 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:31:06 Download gff for
FMO05469.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| E2f2-RA | 197..1317 | 1..1104 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:47:43 Download gff for
FMO05469.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| E2f2-RA | 184..1304 | 1..1104 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:47:43 Download gff for
FMO05469.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 21154646..21154985 | 678..1007 | 97 | <- | Minus |
| 2L | 21155107..21155365 | 419..677 | 100 | <- | Minus |
| 2L | 21155572..21155681 | 309..418 | 100 | <- | Minus |
| 2L | 21155744..21156049 | 1..308 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:48:26 Download gff for
FMO05469.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 21154646..21154985 | 678..1007 | 97 | <- | Minus |
| arm_2L | 21155107..21155365 | 419..677 | 100 | <- | Minus |
| arm_2L | 21155572..21155681 | 309..418 | 100 | <- | Minus |
| arm_2L | 21155744..21156049 | 1..308 | 98 | | Minus |
