FMO05483.5prime Sequence
1214 bp (1030 high quality bases) assembled on 2008-08-25
> FMO05483.5prime
CAGTCGACATGGAAAACCATTTCAGCGCCACCAGTCGCCCCTCAGCCACG
CCCAGAATGTGCACCACCGCCTCTGCCGTCGGTGCTGCCGCCAGCGCCGC
CGCCGCCGCCGGCAACAACAATAACAACAGCAATAGCAGCAGCAACAACA
ACGCAACAACCGGCAACAATTTAAGTGTTAGCACTGCAGCCGGAGGAGCC
ACAAATGCCGCAGCAACGGCACAACCCATCCAAGTGATACCAATGCCCAT
GCTGCCCACCGGAGCGGCGCAAATCATAATTGGCCAGCAGCCACAGGGTC
AGGCGACGGCGACGGGTCTGCAGCCACAATTGATACCGCTGCAGGCCAAC
CAGATTATGCTGCAGGCTGCGCAGCAGCAGCCACAGATGCAGGTGATGCA
GCTGCCCGATGGCCAGACTATATTCTATCAGACGCCCACCATTGCCGCCT
TGGATCCGAATGCAGCGGCCAACGCCGCAGCTGCCATGGCAGCCCAGCCG
ACGCCGCACTACCTCAATATCAATGGGCAGCTGGTGCAGATCAATCCAGC
ACCGAGCGCTAATCAGGCGGCACCCACAGCTGGGCAACAGATTATAATGG
TGCCGCAGACAGCGATGGCAGCGGTGAATGCAGCGGCCGCCAATGCCGGA
GTAGGCGCCGGAGTGGGCACAGTGGTTACCCAACAACAACAGCAGCAGCA
TCAACAAGTACAATCCCAGACCCAAAACCAGCAGCAGCAGCAACAGCAGC
AGACGGTGGCGGCGGTGGCTGCCAGTGCTGCAGTCAATAATATAAGCGCC
GATGTCAGCACAAGTACAACTGGAACGAATACGAACAGCGAGGACGAGAG
CTCCAAGGCGAGGCGGACGAGGAGCCGCTCTATGTGAATGCCAAGCAGTA
CAAACGTATTCTCATTCGGCGGCAGGCCAGGGCCAAGCTAGAGTCGCGCA
TACCCAAGAACGGTGCAAGTATCTGCACGATCTCGTCATCGCCACGCCAT
GAATCGGCTCGTGGCGAGGGTGTCCGCTTCCAATCGCACAGGAGAGGCGA
CCAGATCGTCGGCCCGAGCGGCAGACATGCATGGCGTCAGTGGCGGCGTC
ACCCCCAAGCGTGACGGACCGGCTCGGCCAACTGATCGGCGCCATCAGCC
AGAATACATAACGCGATCAATCGGAGCGAGCTTCTAGAACAATCTGTTGG
GCGCGCGGTCCGCT
FMO05483.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:03:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Nf-YA-RA | 2055 | CG3891-RA | 219..1373 | 9..1144 | 5125 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:03:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9440861..9441892 | 1036..9 | 4915 | 99.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:03:43 has no hits.
FMO05483.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:24:37 Download gff for
FMO05483.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nf-YA-RA | 213..1236 | 1..1022 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:31:08 Download gff for
FMO05483.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3891-RA | 199..1222 | 1..1022 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:47:45 Download gff for
FMO05483.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nf-YA-RA | 213..1236 | 1..1022 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:47:45 Download gff for
FMO05483.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9440875..9441898 | 1..1022 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:24:37 Download gff for
FMO05483.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9433975..9434998 | 1..1022 | 99 | | Minus |
