FMO05484.5prime Sequence
1201 bp (1031 high quality bases) assembled on 2008-08-25
> FMO05484.5prime
CAGTCGACATGCCGCCTGGAACGCAAATTGCCAGCGACAGCGATATGGAG
ACCGCTCTGGAGGAGTTCAAGCAGCGCCAGGGACGCCGCAACAGCATCGG
CTCGGCCAAGTACGCGTGCAGCATGCCCAAATGCGAGGCCACATTCAAGC
GGCTGGACCAATTGGATCGCCATGAGTATCATCACACAGGGATTAAGAAG
CACGCCTGCTCGTACGAGGGTTGCGACAAGACGTACTCGATTGTGACGCA
CTTAAAGAGGCATCTGCGCAGCACCCACGAGCGTCCGGAGTCGGCGGCCA
AGAAGACGGTGAAGTGCGCGCTGGAGGAGTGCAGCAAGATGTTCATCTCG
GTTAGCAACATGACCCGCCACATGCGCGAAACCCACGAGAGCCCAAAGGT
CTATCCGTGCAGCCAGTGCAGTGCCAAATTCTCGCAAAAGCTCAAGCTGA
AGCGCCACGAGATCAGGGAGCACACGCTGGAGTATCCGTACAGCTGCTCG
AAGTGCTCGCGCGGCTTCTACCAGCAGTGGCAGTGCCAGAGTCACGAGCC
CAGCTGCAAGCTGTACGAGTGTCCCGGCTGCCCGCTGCAGTTCGACAAAT
GGACGTTGTATACGAAGCATTGTCGCGACTCGTTGCACGGCAAGAATCGC
CATAAGTGCGACCGCTGCGATAGTGCCTTCGACAAGCCGAGCGAACTGAA
GCGTCACCTCGAGGTGAAGCACAAGGAGGCGGCGCAGACGGATGAGTGCG
CCACCTCCTTCACCTGCAACGAGGAGGGATGCGGCAAGAGTTACTCGTAC
CTCAGAATCTACGCCAGCACATGCTCACCGCCCACTCGGGCAGGCGTTTC
GAGTGCCAGGCCTTGGACTGCGGCCGCTGTTTCAGCAGTGCGCAAATCTG
GCGAGACATCTGCTCAGGATCACAAAGATGGTGCGACGAAAAGAATTGAA
AGCCAAGAGATGACAGGAGTAGACTGGAGAGGGGCAAACTAGTCACATCC
TGCAGCGACGACGCGATGCTGGACGCAGCAAACATCGAGCTATCAACTGG
CTGCTGCATTGACAAGAAATGATGAAGCGGTGCGCGGCACAGCTTGACCT
CGAAAAGATCACAGTCGCTGAAAGGATGACCCGTTAGACTGTCTGCACGA
CCTGCGGATGGGAGGTATGGAAACCGAGAGCACAGCCTTCTATGGATCAA
G
FMO05484.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:45:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9609-RA | 1834 | CG9609-RA | 259..1412 | 9..1132 | 4950 | 96.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:45:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16785736..16786504 | 958..195 | 3630 | 99.3 | Minus |
| X | 23542271 | X | 16786565..16786750 | 194..9 | 930 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:45:33 has no hits.
FMO05484.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:40:14 Download gff for
FMO05484.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9609-RA | 259..1412 | 9..1132 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:31:10 Download gff for
FMO05484.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9609-RA | 229..1382 | 9..1132 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:26:04 Download gff for
FMO05484.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9609-RA | 259..1412 | 9..1132 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:26:04 Download gff for
FMO05484.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16785537..16786504 | 195..1132 | 96 | <- | Minus |
| X | 16786565..16786750 | 9..194 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:40:14 Download gff for
FMO05484.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16679570..16680537 | 195..1132 | 96 | <- | Minus |
| arm_X | 16680598..16680783 | 9..194 | 100 | | Minus |
