FMO05495.5prime Sequence
1209 bp (1029 high quality bases) assembled on 2008-08-25
> FMO05495.5prime
CAGTCGACATGTTCGACGAGCCCATAATCTCCAGCTTCGTTTTTACCAAC
GAGGAGACCACGCAGACATTCCACCACCAGTGGTTTTCCCAGGGCCAGTT
ACACGAATGTGCCACCTGCTACAGCTCCATCGACGCAGATGAGCCGCCCT
CCCAGCATTGGCTGCGGGGAGGAGAAGCATCACAGGGCTTGCATCTTACC
AAGCAACAGCAGGCCGTTATGGATATTATCGAGGCCCGCCAGATCGAGAC
TTTCTTCTTCTGCGACGAGAGTTCCAAGGACAAGCTGGAACACTTCATGG
GCGAGACCTGTGCGAGGGGAATCCCCGAGCTTCTCCGCTGGATGTTCCAG
AACAACACCGTGGCCGTGGAGTTCAATCTGGCCTGCTACGTGAACGCCAT
GGACCAGGTGTTGATCTTTCAGAGCGGCTCGCTGAGGGCGGACCACCACT
ACGACGTAGACGAATCCGTGGGCGTGGTCTACGAGATGCTTATGCAGAGG
ATTGAAAACTACCTCAACTGCAGCAGCGAGTACGGCATGGCAGAGTGCAG
CATCACCAGATTGAAAGTACAGGTGAAGAGGATTAGGGTGGAGGCGGACG
GTCAGTCAGCGGACTCGTCCGTCTTCGCCCTACCCCTGCAGCTTCAGGAG
GAGGAGGGCCTGACCGCCACTACCGGCTGCTCCACCAGCGAGGCAGAGCT
TGCCAGTCTGCGCTCCGCCTACCTGAAAGCACTTCCGCGAGTGCAACGGC
TACTTCCCGCCCAACATGCGCGTCAATCTCTACGGACTGCAGCAGTGCAA
GACCACCAAGGAGCTGTATGTGGTGCCCTATCATATCAGCGAAAACCCTC
CAGCAGCTGCCCAACAAGAACTTCCTCATCCTTGAACAATATCATGGGCC
AATTCCAGCGGCTCCACGAGCTCTCCACCCCCGTCAATTCCATCGAAAGG
GATCAGACCAGCTCGCGCTAAAGGACTCCACTGCGGAGGTGTCGCACCCA
GTCTCGCGACGCAGCAACTGCACATCCACCAAAAGCTGGCGCTGGGGCCA
GGACTTCTCGTGAACGCCATGCAGCGGACTCTGTGGAGATCTACGGCCAT
GCTGCCATTCCGAACTCTCCAGCAGGCTGCAACGGGCATATCAAGCCGAC
CTGAGCGAGGGTCATTGCACTTAGAGTGCGACGTGACAACGGAAGACTCT
CTCTGCAGA
FMO05495.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:13:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| term-RA | 1469 | CG4216-RA | 160..1250 | 8..1095 | 5080 | 98.4 | Plus |
| CG7271-RA | 1407 | CG7271-RA | 100..1187 | 8..1095 | 4920 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:13:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18592560..18593612 | 1059..8 | 4805 | 99 | Minus |
| 3L | 28110227 | 3L | 18588858..18589907 | 8..1059 | 4620 | 98 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:13:54 has no hits.
FMO05495.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:09 Download gff for
FMO05495.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| term-RA | 154..1259 | 1..1106 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:31:23 Download gff for
FMO05495.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| term-RA | 148..1253 | 1..1106 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:43:42 Download gff for
FMO05495.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| term-RA | 154..1259 | 1..1106 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:43:42 Download gff for
FMO05495.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18592509..18593616 | 1..1106 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:09 Download gff for
FMO05495.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18585609..18586716 | 1..1106 | 97 | | Minus |
