FMO05502.5prime Sequence
1191 bp (884 high quality bases) assembled on 2008-08-25
> FMO05502.5prime
CAGTCGACATGGGTAAAAGGCAGCATCAAAAGGACAAAATGTACCTCACG
TACACGGAGTGGAGTGAGCTGTATGGCGGCAAAAAAGTGGAATCCTTGGA
GAACGACCATGTCAAGTTCAAGCGGCTGCCATTCGAGCACTGCTGCATTA
CGATGGCGCCCTACGAGATGCCCTACTGCGATCTACAGGGCAATGTGTTC
GAGTACGAGGCCATTCTTAAGTTTCTCAAGACCTTTAAGGTGAACCCCAT
CACCGGGCAGAAGATGGACTCCAAGTCATTGGTGAAGCTGAACTTCCACA
GGAATGCAAACGATGAGTACCACTGCCCCGCCTTGTTCAAGCCCTTCAGC
AAGAACTCGCACATCGTGGCGGTGGCCACAACTGGAAATGTATACTGCTG
GGAGGCAATCGACCAGCTGAACATTAAGACAAAGAACTGGAAGGATCTGG
TGGATGACACGCCATTCCAGCGTAAGGATATCATCACAATACAAGATCCT
CAGAAGCTGGAAAAGTACGACATCTCGACCTTCTATCATATTAAGAAGAA
TCTACGAGTCCTGACGGAAGAAGAGCAGCAAGAGAGAAAGAATCCAGCCA
GCGGCCGCATTAAGACCATGAATCTGGAGACCAAGGAGACGCTGGAAACA
GCTGCAGCAGGACTATCAACCAGCGGAGAGGAGGCCTCCACTTCGAAGCG
TACAGCTGACAAGTTCAACGCAGCTCACTATTCAACTGGGAGCGGTGGCG
GCCAGTTTTACGTCTACCGCCATGGTGCCCGTTTCCCAATAGAGGCGGCT
ATCATAAGATGATGATTTGGTCAAGTACGAGCGGGTAAAAAGGAGGGCTA
CTTTCGTTTAATACGACCCTGGCCCTCTCAACCTGAGCTCTTCTGCGATC
AAACTCCTCGAGCTGCGATAACTCATCAGCATTGCGCAATGTTACTACAT
ATGTATGTTTACCGGTCCATAAGATTTTTATGGCAGTGGTGATCCACTGA
ATGGTTCTGTGCAGTCATTGGCAGAGTTGAGGACAGTTACCGTCTTACGC
ACGGCCGAGATGCTACATGCATCCGACCAACCAATGATTCTCAGTCTTTA
TCCTTACGTCTTTGCAACTTGACGGCACCACTTGACCTTCGAGATATACC
TCTAAAGGAAATTCCAGTGGTATATCGAGCGACTCACCATT
FMO05502.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:02:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7747-RA | 1696 | CG7747-RA | 97..1117 | 9..1009 | 4405 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:02:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16293057..16293943 | 923..41 | 3890 | 98.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:02:32 has no hits.
FMO05502.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:48:52 Download gff for
FMO05502.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7747-RA | 89..1082 | 1..981 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:31:37 Download gff for
FMO05502.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7747-RA | 85..1078 | 1..981 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:48:03 Download gff for
FMO05502.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7747-RA | 89..1082 | 1..981 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:48:03 Download gff for
FMO05502.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16292990..16293943 | 41..981 | 97 | <- | Minus |
| 2R | 16294003..16294042 | 1..40 | 92 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:48:52 Download gff for
FMO05502.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12181508..12181547 | 1..40 | 92 | | Minus |
| arm_2R | 12180495..12181448 | 41..981 | 97 | <- | Minus |
