FMO05507.5prime Sequence
674 bp (674 high quality bases) assembled on 2008-08-25
> FMO05507.5prime
CAGTCGACATGGCCAACATCCTGGAGAACCAACTGTTCACGGCCGCCAAG
ACCATCGAGCAGCAGCTGGACCAGCAGCTCGACCGCCTGGACAACCTCGA
TTCGGATGACCTAAAGGTCCTGCGGGAGCAGCGGCTCCGCGAAATGAAGG
ACCTGAACAACAAGAAGCAGGAGTGGCTCAGAAACGGTCATGGCACCTAC
ACCGAGCTGGCCGACGAAAAAGAGTTCTTCGAGATGTCGAAAAAGTCGCC
CAACATTGTTTGCCACTTTTACCGCGACAGCACCGAGCGCTGCAAGATCG
TGGACATGCACCTGAAGATCCTCGCGGCCAAGCACGTGGAGGCCAAGTTT
TGCAAGGTGAATGCCGAAAAGACTCCATTCCTCACCCAGCGACTGCGCAT
CAAGGTGATACCCACCATCGCCCTGGTGAAGGACAGCAAGACCAAGGACT
TCATTGTCGGATTCACCGATCTGGGCAACTGCGACGACTTCGCCACCGAA
ATGCTGGAGTGGCGCATCGCCCACTCGGGGGCCATTGACTACAAGGGCGA
TCTGATGCAGCCACCAGATGTGAAACGCAAACCATTCATCAACCGCCCAC
AGAAGACAATACGTGGAGGCTACGACTCGGATGACTCCGATATAGATCTG
GATGACGCAAGCTTTCTAGACCAT
FMO05507.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:52:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4511-RB | 1407 | CG4511-RB | 110..759 | 7..656 | 3250 | 100 | Plus |
| CG4511-RA | 1452 | CG4511-RA | 155..804 | 7..656 | 3250 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:52:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 10855294..10855764 | 186..656 | 2355 | 100 | Plus |
| 3R | 32079331 | 3R | 10854854..10855033 | 7..186 | 900 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:52:07 has no hits.
FMO05507.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:47:36 Download gff for
FMO05507.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4511-RA | 148..809 | 1..663 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:31:41 Download gff for
FMO05507.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4511-RA | 146..807 | 1..663 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:22:31 Download gff for
FMO05507.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4511-RA | 148..809 | 1..663 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:22:31 Download gff for
FMO05507.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 10854847..10855032 | 1..185 | 97 | -> | Plus |
| 3R | 10855294..10855769 | 186..663 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:47:36 Download gff for
FMO05507.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6680569..6680754 | 1..185 | 97 | -> | Plus |
| arm_3R | 6681016..6681491 | 186..663 | 99 | | Plus |
