FMO05508.5prime Sequence
755 bp (755 high quality bases) assembled on 2008-08-25
> FMO05508.5prime
CAGTCGACATGTCGGACAGCGATACGGACACCGTGGACGAGCTTTTCCAC
CTTGCCACCGAGCATGTGGCCAAGCAGTCAAACAGCATTGGTTCCGCGGA
CCTTTTAATATTTTACGGATACTACAAGCAGGCCACGAATGGCCCCTGCA
AGGAGCAAAGTCCGGGTCTGCTTCAACTGCAGGCCAAGAGCAAGTGGCAG
GCTTGGCGCAATCTGGGAACAATGTCCCAGTCCGCTGCCCGGCAGGCCTA
CGTCCAGAAGCTGCAGGAGCTTCAACCCAACTGGCGGTCCCGGCGCAACC
CAGGCTGGGTCGTTCATTCCATTGAGTCGGTCCCACTGGAGGACCAACGT
TTGGACAGTGAAAAGACCCTGTTTGACCACGTGAAGGAGAACAATCTAGA
CAGGCTGAGGGAACTGCTGCAGCCAAGTGACTTGGTTAAGCTGGACGAGC
ATGGCATGGCGCTCATCCACTGGGCTACCGATCGCAATGCCGTCGAAATC
ATACAGTTCCTGGTGCGGAGTGGGGCCAGTGTAAATCAGCGAGATGCGGA
GCAACAGACTCCGCTGCACTACGCCGCCAGTTGTGGACACTTGGAGGCGC
TCCAATGCCTGTTGGAGCTACACGCCAGCCTGGAGCTACGCGATTCAGAT
GGACAGACTTGTTACGACGTGGCTGACGATGAGCAGATCTGCCAGGTGCT
TCAAACGGACGGGAAACGACTCGCTGGATCCGCGTCCGCAAGCTTTCTAG
ACCAT
FMO05508.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:07:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33714-RB | 1279 | CG33714-RB | 417..1148 | 6..737 | 3615 | 99.7 | Plus |
| CG33714-RA | 1278 | CG33714-RA | 416..1147 | 6..737 | 3615 | 99.7 | Plus |
| CG33713-RB | 1278 | CG33713-RB | 416..1147 | 6..737 | 3615 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:07:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 21318067..21318798 | 737..6 | 3615 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:07:55 has no hits.
FMO05508.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:23:18 Download gff for
FMO05508.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33713-RB | 411..1150 | 1..741 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:31:43 Download gff for
FMO05508.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33714-RA | 411..1150 | 1..741 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:40:38 Download gff for
FMO05508.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33713-RB | 411..1150 | 1..741 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:40:38 Download gff for
FMO05508.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 21318064..21318799 | 1..741 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:23:18 Download gff for
FMO05508.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 21189091..21189826 | 1..741 | 98 | | Minus |
