FMO05518.5prime Sequence
497 bp (497 high quality bases) assembled on 2008-08-25
> FMO05518.5prime
CAGTCGACATGCTCGACATGGGCTTCGAGCCCCAGATCAGAAAGATCATG
CAGCAGATCCGACCGGACCGTCAGGTACTCATGTGGTCAGCTACCTGGCC
CAAAGAGGTGCGCCAGCTGGCCGAGGAATTCCTTAATAACTACATACAGG
TGAACATTGGTTCGCTTTCGCTGAGCGCCAATCACAACATCCTCCAGATC
GTGGACGTGTGCGATGAGAATGAGAAATTGATGAAGCTGATCAAGCTGCT
AACAGACATCTCGGCGGAGAACGAGACCAAGACCATCATTTTCGTGGAAA
CCAAGAAGCGTGTGGACGAGATCACGCGCAATATCTCCCGCCAGGGCTGG
CGCGCATGCGCCATCCACGGCGATAAGTCGCAGCAGGAGCGCGACTTTGT
GCTCTCGAGCTTCCGCAATGGCCGGCACTCGATACTGGTGGCCACCGATG
TGGCTGCCCGCGGACTCGGTGAGTATACGGCAAGCTTTCTAGACCAT
FMO05518.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10077-RC | 3634 | CG10077-RC | 1206..1676 | 9..479 | 2355 | 100 | Plus |
CG10077-RD | 3420 | CG10077-RD | 1070..1529 | 9..468 | 2300 | 100 | Plus |
CG10077-RA | 3543 | CG10077-RA | 1193..1652 | 9..468 | 2300 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 6953762..6954232 | 479..9 | 2355 | 100 | Minus |
3R | 32079331 | 3R | 6004034..6004244 | 218..8 | 395 | 79.1 | Minus |
X | 23542271 | X | 7929009..7929112 | 111..8 | 265 | 83.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:23:32 has no hits.
FMO05518.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:33:04 Download gff for
FMO05518.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10077-RC | 1198..1683 | 1..488 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:31:52 Download gff for
FMO05518.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10077-RB | 11..496 | 1..488 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:01:22 Download gff for
FMO05518.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10077-RC | 1198..1683 | 1..488 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:01:22 Download gff for
FMO05518.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 6953754..6954237 | 1..488 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:33:04 Download gff for
FMO05518.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 6946854..6947337 | 1..488 | 98 | | Minus |