FMO05523.5prime Sequence
784 bp (784 high quality bases) assembled on 2008-08-25
> FMO05523.5prime
CAGTCGACATGTCTACGCCATATGTGATCTTGCTGATCGGTTTACTATAT
CTTTGCGTGGGCCCATTCATAATTGCCCAAGGCTCGGAGTTTGCTGAGCG
CAACCACAAGAAACGCCAAATCTATCGGGAACAAGTATTGCCACATGCGG
GTGGTAAGATACCCGACACCGCCTTTGAGACGGATCGATTGTTTTTGAAT
CGCCTGCAGAAGGAGGGCATCGCAGTGCCAGATGGGATAGTTCCCGAGCA
GCGGAATCCGCAGGTGTATCAGTACTACAGCAAGCCCATGCGCACCGTCT
TCCACATCGCCCTGAGCTCGGATGGGAGGTATACGCCGCGGGAGGGACGA
TACCACTACCGCCAGGTGCCAACGGTGGAGACCACGTACCTGTACCCGCA
GGCGGTGGGCCGCCAGCACGTGGTGGTGCCACCGAAGCACGCCCTGCCCA
TCTACCGGCAGCTTCAGTTGCACAATCCGCTGCTCAACCAGGTCAAGTTG
CAGCCAAAGAAGGCGCCCAATTTTCTGGAACTGGCGCCCACGGTTGGCAA
GAGTCAGTCGCATCCATTGGCCGGTTCGGCCAAGGCGCAGTCTTATCAGA
ATGTGAATCTTCTGCATGGTCACAGTCCGGTGCTGCCCGCTTTCAAGAAA
ACCTCCAGGGGCAGCAAGACCTATGTGGACAGCTATGGCACAACCCATCT
CTTCAGCGAGTTTGACGATCTGCTGAACAAACTGGACCTGCAGCAAACGG
GACGAAAGAATTATGCAAGCTTTCTAGACCATTC
FMO05523.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:28:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32037-RB | 1836 | CG32037-RB | 417..1172 | 9..764 | 3780 | 100 | Plus |
CG32037-RA | 1540 | CG32037-RA | 417..1172 | 9..764 | 3780 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:28:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 9490566..9490818 | 513..261 | 1265 | 100 | Minus |
3L | 28110227 | 3L | 9490323..9490508 | 698..513 | 930 | 100 | Minus |
3L | 28110227 | 3L | 9491472..9491630 | 265..107 | 795 | 100 | Minus |
3L | 28110227 | 3L | 9491698..9491799 | 110..9 | 510 | 100 | Minus |
3L | 28110227 | 3L | 9490166..9490231 | 764..699 | 330 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:28:39 has no hits.
FMO05523.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:25:15 Download gff for
FMO05523.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32037-RA | 408..1178 | 1..773 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:31:44 Download gff for
FMO05523.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32037-RA | 387..1157 | 1..773 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:13:29 Download gff for
FMO05523.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32037-RA | 408..1178 | 1..773 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:13:29 Download gff for
FMO05523.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 9490159..9490231 | 699..773 | 94 | <- | Minus |
3L | 9490323..9490507 | 514..698 | 100 | <- | Minus |
3L | 9490566..9490815 | 264..513 | 100 | <- | Minus |
3L | 9491474..9491626 | 111..263 | 100 | <- | Minus |
3L | 9491698..9491808 | 1..110 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:25:15 Download gff for
FMO05523.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 9483259..9483331 | 699..773 | 94 | <- | Minus |
arm_3L | 9483423..9483607 | 514..698 | 100 | <- | Minus |
arm_3L | 9483666..9483915 | 264..513 | 100 | <- | Minus |
arm_3L | 9484574..9484726 | 111..263 | 100 | <- | Minus |
arm_3L | 9484798..9484908 | 1..110 | 97 | | Minus |