FMO05525.5prime Sequence
1213 bp (862 high quality bases) assembled on 2008-08-25
> FMO05525.5prime
CAGTCGACATGCAGCACGACGATGTGGTCTGGAGCATCATCAACAAGTCC
TTCTGTTCGCACAAAGTGAAAACCGACACACGCACCTTCTGCCGCCATGA
GTACAATCTCACGGGTCTGTGCACACGCAGAACGTGTCCGCTGGCCAATT
CACAATATGCCACCGTTCGCGAGGAGAAGGGCATCATCTATTTGTTCATC
AAGACGGCGGAGAGAGCGCATATGCCGAGCAAATTGTGGGAGAGGATCAA
GTTGTCCAGAAACTTCGAGAAGGCCATCGAACAGATCAACGAGAATTTGG
TTTTCTGGCCCAAATACATGATCGCCAAGAATAAGCAGCGTTTCCTCAAG
ATCACCCAATATCTGATACGAATGCGTCGTCTGAAGTTGCGCCGCCAGAA
GCTCATTGTGCCGCTATCGACGAAGATCGAACGGCGGGAGGCGCGGCGCG
AGGAGAAGGCCTTGGTGGCCGCCAAGATCGACAATCACATCGAGAAGGCG
CTGATGGATCGTCTGAAGAATGGCACCTATCGCGACATCTACAACTTTTC
GCAGACCGCTTTCAACAAGGCTCTGGAGGCGGAACGCGTGGACGAGGATG
ATGAGGGAGGAGCTAGACGACGAAGACGAGAAATGAGGAGCAGCTGGAGC
GCGAAATGGAGGTGGACGGCGACGATTCACGCGAAGCTGAGGAAGTACAG
AGATCCCTGCTCGACGAGGAGTTCGTCGAGGCAGATACGGACGATGAAGA
GGAGGATGATGATGATGATGATGATGATGACAAGGACGACTACGACAGCG
ATTCCCGGCAGCGGAAAGTTCGAGGTGGGCAGCGAATTCCAGAATCCGAC
AAGGATGAACGATGCGAATGCAATGATATTGAGAGAACAAAGTGCCGGCC
ATAAAACCGCAGCAAACGCAAAACGACAAAAATTCCGGCGGCAACAGTCG
ACCCACCGCCTCGAGCCAAACTGCAGCTGGATACGAGATGAGGTGGAAAA
GGAGACAGCGCGATTGATATTCAGCTTCTAGACATTCGTTTGGGCGCGCG
GTCCAGTATGGTCATAACTAACCTAATCATACTTATCCACTTACCTTGGA
AATCTTGTACTGATATGCTTGATTTCACTATAAAAGCCGGGGACCGAGCT
CTGAAATCAGTGATCAGAGTCTCCGGTTAACTTCACCACGGATGCCATAG
CGAGCTCATTCAT
FMO05525.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:14:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rbm13-RB | 1535 | CG10648-RB | 99..1107 | 8..1004 | 4265 | 96.2 | Plus |
| Rbm13-RA | 1238 | CG10648-RA | 99..1107 | 8..1004 | 4265 | 96.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:14:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8901998..8902811 | 71..883 | 3590 | 97.7 | Plus |
| X | 23542271 | X | 8901880..8901926 | 24..70 | 235 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:14:10 has no hits.
FMO05525.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:17 Download gff for
FMO05525.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rbm13-RA | 101..1123 | 1..1010 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:32:03 Download gff for
FMO05525.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rbm13-RA | 103..1125 | 1..1010 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:43:48 Download gff for
FMO05525.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rbm13-RA | 93..1115 | 1..1010 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:43:48 Download gff for
FMO05525.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8901998..8902811 | 71..882 | 97 | -> | Plus |
| X | 8901880..8901926 | 24..70 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:17 Download gff for
FMO05525.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8795913..8795959 | 24..70 | 100 | -> | Plus |
| arm_X | 8796031..8796844 | 71..882 | 97 | -> | Plus |
