FMO05528.5prime Sequence
1192 bp (962 high quality bases) assembled on 2008-08-25
> FMO05528.5prime
CAGTCGACATGGCGAGCAAGCGGCTAATGCTCGATGTGGAGGAAGAAGAT
GATGAAAGTGGAGCGTGTGGTCAGGAGAATTTCGATCCCCATGATGCCGA
TATGGAATACCAGGCCAAAAGGCGAAAATCAGCCGTGCAGGAGACTCCGC
TGCAATGGATGCTGAAGCGGCATATTCCTGCCAGCACCACCGTTCTGTCG
CCCATCACCGAATTGTCGCAGAATATGAATGGAGCCCGCCTGGATGGCAC
TCCCAAGTCCACCCAGAGAATCCCAGCCAACAGGACCCTGAATAACTTTA
ATAGCCTGTCCTCGCGAACACTCGGCAGTTTCAGTAGCTCCTGCTCGAGT
TACGAGTCGGGCAACTCGCTGGATGATGAGTACATGGACATGTTCGAAAT
GGAATCAGCCGAGAATCACAATCTTGAGTTGCCCGATGACTTGGAAGTGC
TCCTCAGCGGACAGCTGAAATCGGAAAGCAATTTAGAGGAGATGTCCAAC
AAAAAAGGCTCCCTGCGTCGCTGCCTTAGCATGTATCCCAGTGAACAGCC
AGAGGAAGCGGTTCAAGAACCAGATCAGGAGACCAACATGCCCATGAAGA
AGATGCAACGGAAAACTCTATCAATGAACGACGCCGAGATCATGAGAGCA
CTGGGAGATGAACCAGAGTTAATCGGAGATCTCAGCAAGCCATGTACCCT
GCCCTGTTTGGCGACAGGCATTAGACATCGTGATCTAAAGACCATCTCCA
GTGACACATTGGCCCAGACTGATTCAGGCGAGTTTGATGAACAATTGGGA
AGCCAGGGCGGATACGAGATCATAGACTGCCGTTACCCATACGAGTTCCT
TGGCGGACACATACGGGGAGCGAAGATTTGTACACACGTGGGCAGATACA
GGAGCGTTTCCCACGCTGACCTCAATCAGAAAATCGACGCATCTACGTCT
TCACTGTGAGTTCTCCTCGGACGGGTCCAAGCTATTGCGCTACTGCGGAG
CACGACGAGTCAGCATACCACACTATCGCCTGACTATCTGACTTTAATCT
GCACATGGGTACAGATTCTTCGTTTATCTCGACTATGCAGCAGCAATGTA
CATGCTGCACGGCCAATATAGTCGATTTCGCCACAGTCTGCAATGCAAGC
GAACGTAATCGGTAGCTTCGACTCGATCCGTTCCAAGGTCTA
FMO05528.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:28:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| twe-RD | 1916 | CG4965-RD | 288..1365 | 9..1063 | 4780 | 97.7 | Plus |
| twe-RC | 2240 | CG4965-RC | 149..1226 | 9..1063 | 4780 | 97.7 | Plus |
| twe-RB | 1803 | CG4965-RB | 175..1252 | 9..1063 | 4780 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:28:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 16260538..16261505 | 971..9 | 4495 | 99.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:28:45 has no hits.
FMO05528.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:25:20 Download gff for
FMO05528.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| twe-RB | 171..1207 | 1..1027 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:32:08 Download gff for
FMO05528.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| twe-RA | 282..1318 | 1..1027 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:13:33 Download gff for
FMO05528.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| twe-RB | 171..1207 | 1..1027 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:13:33 Download gff for
FMO05528.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 16260513..16261510 | 1..993 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:25:20 Download gff for
FMO05528.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 16260513..16261510 | 1..993 | 98 | | Minus |
