FMO05530.5prime Sequence
1120 bp (949 high quality bases) assembled on 2008-08-25
> FMO05530.5prime
CAGTCGACATGAAATACGAATATAAGCTGCTGGCCACGGATGAGAAGCCA
CCGCGGCGGAAAAGTAGCGGATCACCAAATGCCAGCAGTGGTGGAAACCG
CGGGCCCAGCGGCCTCAAGATCTCCTTCCTGTGCCTGATCATCTCCGTCA
TCCTCCTGCTCTTTGTCTTTGGCTTCGTCTCCGAGAACGCCAGTCCGTAT
CTGGCCCGTTTGGCCTCCAAGTTTGGCTACAGCAAGGTGCAGTATGCGGC
CATCATCGATGCCGGATCGACGGGCAGCCGTGTGCTGGCCTACAAGTTCA
ATCGCAGCTTCATCGACAACAAACTGGTGCTGTACGAGGAGCTGTTCAAG
GAGCGCAAGCCGGGTCTGAGCTCCTTCGCGGATAATCCCGCCGAGGGTGC
CCACTCCATCAAACTGCTGCTGGACGAGGCCCGCGCCTTCATACCCAAGG
AGCACTGGTCTTCCACACCGCTGGTTCTGAAAGCGACCGCCGGCCTGAGA
CTCCTGCCCGCCAGCAAGGCGGAAAACATTCTAAATGCCGTCCGAGATCT
CTTCGCCAAGTCCGAGTTTAGTGTGGATATGGATGCCGTGGAGATCATGG
ACGGCACGGACGAGGGCATCTTCAGCTGGTTTACCGTGAACTTCCTGCTG
GGCCGCCTGTCCAAGACGAACCAGGCAGCTGCCTTGGACTTGGGCGGCGG
TAGCACGCAAGTAACCTTCTCGCCAACGGATCCGGACCAGGTGCCCGTGT
ACGATAAGTACATGCACGAGGTGGTCACGTCCAGCAAGAAGATCACGTCT
TTCACGCCCAGCTATCTGGGACTGGGTCTAATGGCTGCACGCCCTGCTGT
CTTCACGCACGGCTAAAGAGGGAGGATACGGTGCTGGAGAGCGTCTGCCT
GAATCCCATAATCGCCATTCGCACCGTGGACATACGGCATGTGCATACAA
GGCCAGCGGCAGGAAAATGGCAGTCCATGCCGACCACCCATTGTGGACTC
CATGCTGCTGGAGCTGGTCAGAGCAGGTAATGCCGCTGGTCAGCCCAACC
GTTCACCCTCAGCAACCGCGGGGGCCGCGTTCAGCTACTACTTTGGACGG
GCATCGAATCGGGCTCTGTG
FMO05530.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:16:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| NTPase-RA | 2095 | CG3059-RA | 186..1307 | 8..1113 | 4880 | 96.8 | Plus |
| NTPase-RC | 2182 | CG3059-RC | 293..1393 | 29..1113 | 4775 | 96.7 | Plus |
| NTPase-RD | 2107 | CG3059-RD | 218..1318 | 29..1113 | 4775 | 96.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:16:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2881566..2882512 | 1102..171 | 3595 | 95.9 | Minus |
| 2L | 23513712 | 2L | 2882691..2882834 | 172..29 | 720 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:16:03 has no hits.
FMO05530.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:01:41 Download gff for
FMO05530.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NTPase-RA | 186..1311 | 8..1118 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:32:12 Download gff for
FMO05530.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NTPase-RA | 173..1298 | 8..1118 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:47:14 Download gff for
FMO05530.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NTPase-RA | 186..1311 | 8..1118 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:47:14 Download gff for
FMO05530.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2881550..2882511 | 172..1118 | 96 | <- | Minus |
| 2L | 2882692..2882833 | 30..171 | 100 | <- | Minus |
| 2L | 2882920..2882941 | 8..29 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:01:41 Download gff for
FMO05530.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2881550..2882511 | 172..1118 | 96 | <- | Minus |
| arm_2L | 2882692..2882833 | 30..171 | 100 | <- | Minus |
| arm_2L | 2882920..2882941 | 8..29 | 100 | | Minus |
