FMO05531.5prime Sequence
497 bp (435 high quality bases) assembled on 2008-08-25
> FMO05531.5prime
GGGGATCCACCCGGTCCGGATGAGCTGGACAGTCCAGCCATCGAGGCGGC
GGCCCTCGACATTCCCCCTCCCGAATCCGATAAGGCGCTCCAAAAAGGTG
TCTGGGAGCGAGCCACAAGTGCTGAGTATAAGCCGACCACGGATGGGAGC
ACCGTGCTCCGCTTTGACATCTTGCTGGCCCACATAATGCCGCCCGATGG
CGAGGATGTGAAGATCAAGCGGTTCGTGGTCTATGAGCTCACTGTTAAGC
AGGATGGAGCCACGGAGGACACTCAGCCGGCAAAGATTGAGCGCCGATAC
ACCGACTTTCGGGAGCTTTATCTGGGCCTTAAGCGGCAGCATCCGGCGGA
GATGGCCAACAAGTACTTCCCAGCCCAGGTCCTGATGGGTAACTTCAAGT
CCGAGCTGATCGGCGAACGGAGTGCAGCCTTCGAGGCATTCCTCACGTAT
GTGGCAAGCCAGGCGATGCTCCGGGACTCGGAGTACTTCCTGCGCTT
FMO05531.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:02:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3077-RB | 2025 | CG3077-RB | 209..705 | 1..497 | 2470 | 99.8 | Plus |
| CG3077-RA | 1372 | CG3077-RA | 218..714 | 1..497 | 2470 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:02:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2764799..2765200 | 497..96 | 1995 | 99.8 | Minus |
| 2L | 23513712 | 2L | 2765282..2765380 | 99..1 | 495 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 22:02:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3S18 | 6126 | 3S18 DM23420 6126bp Derived from U23420 (g733531) (Rel. 48, Last updated, Version 3). | 1158..1239 | 183..265 | 115 | 63.1 | Plus |
FMO05531.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:49:07 Download gff for
FMO05531.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3077-RA | 218..714 | 1..497 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:32:14 Download gff for
FMO05531.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3077-RA | 239..735 | 1..497 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:48:13 Download gff for
FMO05531.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3077-RA | 218..714 | 1..497 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:48:13 Download gff for
FMO05531.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2764799..2765198 | 98..497 | 99 | <- | Minus |
| 2L | 2765284..2765380 | 1..97 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:49:07 Download gff for
FMO05531.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2764799..2765198 | 98..497 | 99 | <- | Minus |
| arm_2L | 2765284..2765380 | 1..97 | 100 | | Minus |
