FMO05534.5prime Sequence
857 bp (857 high quality bases) assembled on 2008-08-25
> FMO05534.5prime
CAGTCGACATGAAAGTATTCATCTGCTTAGCCGCTCTGCTGGTGGCCTCC
GCCTGCGCCAGCAAAACCGAGGGTGAGAAGGTGCCGCTGGAGAAGAAGCT
GGACAAGCGCGGCCTGCTCGATCTGGGCTACGGCTACGGTCATGCTGGTC
TGGACACCGGCTACCTGGGACATGGTTCCATCTCCGGCCACGGAAGCTAC
GGACATGGCTACGGACTGACCGGATACTCCGCACCCGCTGCCGTCGCCGT
GGGCCACAGTGGTCCCGCGATCGCCGTTGGACACACTGCTCCCGCCGTCG
CTGTCCACCACGCTCCCGCCCCCTATGTGATCAGCAAGCAGGCCGATGTG
CACAAGACCATCACCATCACCAAGGGAATCCCAGTGCCCGTGCATGTGGA
CCGCCCCTATCCCGTCGTCCATGAGAAGCGCGTGCCCGTCGAAGTTAAGG
TGCCCGTGCCCCAGCCCTACGAAGTCATCCGCAAGGTGCCCGTGACCGTT
AAGGAGTACGTCAAGGTGCCCGTGCCAGTGCCCCAGCCCTACGAAGTGAT
CCGTCACGAGAAGGTGCCCGTCCATGTGCCCGTCGATCGCCCAGTGCCCG
TTGAGGTGCCCAGGCCCTACCCCGTGCCAGTGGCCAAGCCCTACCCTGTC
TACGTGGAGAAGGCCGTCAATGTCCAGGTGCCCGTGCATGTGGATCGTCC
CTACCCCGTCTACGTGAAGGTGCCCGTGGTGTCCCACTCCGTGGTCAAGC
ACGCACCCACCGTTGCCGTCAGCAGCTACCCTGTTAGCGCCATTGGCCAC
GATGCCACCGTCTACTCCGACCACCATGGTTACCACAAGGCAAGCTTTCT
AGACCAT
FMO05534.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:04:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16884-RA | 1413 | CG16884-RA | 107..937 | 9..839 | 4155 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:04:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13945232..13946050 | 839..21 | 4095 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:04:39 has no hits.
FMO05534.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:25:12 Download gff for
FMO05534.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16884-RA | 98..942 | 1..845 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:31:59 Download gff for
FMO05534.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16884-RA | 96..940 | 1..845 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:48:13 Download gff for
FMO05534.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16884-RA | 98..942 | 1..845 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:48:13 Download gff for
FMO05534.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13945227..13946050 | 21..845 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:25:12 Download gff for
FMO05534.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13945227..13946050 | 21..845 | 99 | <- | Minus |
