FMO05544.5prime Sequence
680 bp (680 high quality bases) assembled on 2008-08-25
> FMO05544.5prime
CAGTCGACATGAACGCGCGTTCGCAGGTTTTTGATCTGACCATGGAGGGT
CGTCAGGTGGACGAGGCGGTGGCCACCATTTTTCACACCGTCCTCTTCCA
CCGCTGCTTGGGCAAGTACATGTACACGGGCGACGCCCAATACTCGATTG
GCACGGTCGGCTACACGGACGTCGATTGCAACTTCATCGACTTCACCTAC
GTGTGCTGCACCTCGGACAGCTTGACACACAAGGTGAAGCGGGCCATCAA
CTCGTTCAGCGAGAAGCTGCGCTCCAACGAGAGCTGTGGCTCAGGCCAGA
TCAGCCTGGAGTTCTTTCAGAAAAAGAAGAACCGCTGGCCCTTTCCGCAG
GAGTCGATCCCATGGGAGGTGTGGACGGTGCACCTGGATCTGATCAAGCA
CGAGAACGAGGATGAGAGGCAGCTGTGCCGCGAGAATGTCTCCGATCTCC
TGACCGAAAAGGTCATATACATCACCGAGCTGATGAATCGGCACGATTAC
GTGCCCAAAACGCCCAGCCAGAGCGAACTGGACCTGATCTTCGACACATC
CTTTCCGGACGTGCAGCCGTATTTGTTTAAGTTTGACTACTCCACCTCGG
GCTCGGCTGCACCCTCCATGGGTAACGCCATGAAGAAGATCATCAAGGAA
ACGCTCGCAATGGCAAGCTTTCTAGACCAT
FMO05544.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:04:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Atg101-RA | 1850 | CG7053-RA | 231..884 | 9..662 | 3270 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:04:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18791898..18792551 | 9..662 | 3270 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:04:46 has no hits.
FMO05544.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:25:18 Download gff for
FMO05544.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7053-RA | 224..884 | 1..662 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:32:31 Download gff for
FMO05544.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7053-RA | 224..884 | 1..662 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:48:18 Download gff for
FMO05544.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Atg101-RA | 224..884 | 1..662 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:48:18 Download gff for
FMO05544.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18791891..18792551 | 1..662 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:25:18 Download gff for
FMO05544.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18685924..18686584 | 1..662 | 99 | | Plus |
