FMO05551.5prime Sequence
1181 bp (998 high quality bases) assembled on 2008-08-25
> FMO05551.5prime
CAGTCGACATGTCGTGGGTCTCCGACTACAAGTACACATGGACGGAGCGG
ATAGCGATGCGAACGCTGCGCGCCTGTGGCTACATTCCGCACCACGTCGC
CTTCGTGATGGACGGTAATCGGAGGTTCGCCCGCTCACAGCAGATTGATA
AGATCGAGGGTCATTCGCGGGGATTCGAGAAGCTTGCGGACTGCCTGCGC
TGGTGCCTGGACGTTGGCGTCCGCGAGGTGACCACCTTTGCCTTCAGCAT
CGAGAACTTCAAGCGTTCCAACGAGGAGGTGGAGGGTCTGTTCAATTTGG
CCAGAGAGAAGTTTGCCCGCCTGCTGGAGGAGACTGCTCGACTGGACGAA
CATGGCATCCGCATTCGGGTGATTGGTAACATCGAGCTACTGCCACACGA
CTTGCAGAAACTAGTGGCTTCGGCTATGCTTAGCACGGAGCGCAATGACA
AGCTCTTCCTGAACGTCGCCTTTGCGTACACGTCGCGGGATGAGATTACG
CAGGCGGTGGAAACGATACTGCGGCATGGCAGCCAGGATTTGGCGGGCGA
GGACATCAGTGAGCGGTTGCTGGAAGAATGCCTCTACACGCGACACTCGC
CGCCACCGGATCTGGTGTTCCGCACCTCCGGCGAGACTAGGCTAAGCGAC
TTCATGATGTGGCAGTTAAGCACATCCGTGTTGTACTTCAGCAACGTCCT
GTGGCCGCAGATCACTTTCTGGCATTTCCTGGCCAGCATTCTGGCCTACC
AGCGTGATCGCTGGCAGCTGGACGACTTTCGGCGAGCGGAGAGGATGCAG
AGCTGCCAGCTGGCCAGGCGACTGACTTCTACAGCGAACGCGTCCAGAAT
TTCCTGACCACCATCGATGAGATCGCGGAAGCTGCTGTGCGACTGGCCGC
ACGCAAGCTTTCTAGACCATTCGTTTGCGCGCGGCCCAGGTAGTGTCATA
TCATATCATATCATAATCATATCACACTAGCTAGAGATCTGTCATGACTA
GTGCTGATCTCACATAAAAACGCCGCCGCCACGACGTCTGACCATTCGAT
GATTCTGAGTCATACTGATCTCACGATCAGCGATTGATCCAATAGCCGCC
TGCACTCATCGATATCTGTGAATCTAGACTCGGCATGACCTCAACCGCAG
TACCTGTATCGCCGCATAGACCTGTGCCTGC
FMO05551.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:16:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10778-RB | 1251 | CG10778-RB | 44..940 | 8..900 | 4385 | 99.6 | Plus |
| CG10778-RA | 1346 | CG10778-RA | 139..1035 | 8..900 | 4385 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:16:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7932537..7933194 | 665..8 | 3290 | 100 | Minus |
| X | 23542271 | X | 7932056..7932297 | 900..663 | 1010 | 98.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:16:49 has no hits.
FMO05551.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:02:19 Download gff for
FMO05551.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10778-RA | 132..1040 | 1..909 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:32:39 Download gff for
FMO05551.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10778-RA | 80..988 | 1..909 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:47:38 Download gff for
FMO05551.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10778-RA | 132..1040 | 1..909 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:47:38 Download gff for
FMO05551.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7932051..7932294 | 666..909 | 96 | <- | Minus |
| X | 7932537..7933198 | 1..665 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:02:19 Download gff for
FMO05551.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7826084..7826327 | 666..909 | 96 | <- | Minus |
| arm_X | 7826570..7827231 | 1..665 | 99 | | Minus |
