FMO05557.5prime Sequence
1183 bp (995 high quality bases) assembled on 2008-08-25
> FMO05557.5prime
CAGTCGACATGCGCCTGTGCCCGCTGGCGTTCGCCGTGCTGCTTGGCCTT
TTTCACCTGATCCAGGCCTGCAATCATTGGGTTCTTCGCGAGGAGCAGAT
CGTGCCCAAACTGGACTCTCCATTCCACATGCGTGAACCCCACAATCTGG
CGGCATTTCTCAAGCAGATCAGGTACAGTGAGTATGTGGAGCGCTCCTAT
CTGGATCTGCTGCGCAAGCGGGAACAGATTGTGGAGCACCTACGATTTTC
GATGCGTTTCGGTGAGGATCTGGCCGAGCAGGCCAAGTGCGCCATGGACT
ACTACATGCTGGAGAAGCGAATGTCTTACCTGAAAATTACGCCAGAGCAG
TTGAAAAGGATTAATCTTCCGGACCAGAGGCAATTGCACATACAGAAGAG
CGCATCCTCGATGGGAATGGAGCCGATATGCAGCGATTACCATCGATTAA
GCGTGGGTCCAGCCACCTATGATCATCTGGAGAGTTTTCGGCCCGAGGTC
CTGGCCGCTGCCTTTCTGGAGCGCGAGCATGACACCAATGTGGGCATGGC
CACCGTGGAATTGACCCGGCGATTTGCGGTGGACGGATTGCAGCATCATC
CGGCCTCCTGGAAGTTCCACACCCTAAGCTCGTACTATTGGCGCATGCGA
GGAAATGCCCGGGAAGCCCTGCCCTGTGCCAGATTGGCTGCCTTGCTGGC
TCCGCCGATCTTTAAGGATATACCCCTGCTGAGTCTGGGTACCATACTCT
TTCGAATGGGTCGACTGGCCGATGCCGATCTGATATTGACCGCTGCGGTG
GAACATGCTCCTAATGTGGCCGAGAATCATGTGGTCCTGGCCTCTGCACT
GGCCATGAAACACGACTTTAATCGATCACTGCAGCACTTCGACGAAGCGA
GCGACTGGATCCCAGCACATTGCGAGACACAGCAGTGCGAAACTTTATAG
TTGCTAGAGACTAACGAGAAACTCAGATGTATAGCTATGTGAGTACATGC
GACGAGTGAGGAGTCAGGAGCTGAGCATCCATTCTCTCAGATCAGAAGAG
ATGATCAACGCACTGCATGGGAGCGGAACGTCTGCTGCTGACGCAAACAC
ACGATGATTCCATCGAGGATCATCTGCAACAGACCGATGTCCAAGTACCG
GGGTGTTTTGGACTCTCATTCGAACTGCATGCC
FMO05557.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:04:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11436-RA | 1996 | CG11436-RA | 72..1177 | 9..1086 | 4740 | 96.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:04:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4550892..4551807 | 923..9 | 4530 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:04:37 has no hits.
FMO05557.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:12 Download gff for
FMO05557.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11436-RA | 72..1095 | 9..1014 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:32:46 Download gff for
FMO05557.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11436-RA | 74..1097 | 9..1014 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:38:50 Download gff for
FMO05557.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11436-RA | 72..1095 | 9..1014 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:38:50 Download gff for
FMO05557.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4550784..4551807 | 9..1014 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:12 Download gff for
FMO05557.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 4444817..4445840 | 9..1014 | 98 | | Minus |
