FMO05561.5prime Sequence
1153 bp (928 high quality bases) assembled on 2008-08-25
> FMO05561.5prime
CAGTCGACATGAGTTCAGACGAGTCCAGCGACGGTTTGGAGGAGCTGCAG
AGTCTGAAGGCCCTCTACGGCCAGCAGGAGCAAGAGAAACCGGCAAAGAT
CAAAAGGGAACGTTATATTCCAAAGGCCTCGCAGGCCAAGGAGCTCAACT
ATGTGGAGGTGCCCATGGAAAAGGTGCTCTTCGGCGACAGGCAGCGACTG
CTCACCAATCTAGCCAAGTCCGTGGGACAAAAGTTGCCGAACGATGACGA
AGACGAGCAGGAGGAAAATCCCGGCCAGGCAAAGCCAGGCGACAAGCGGA
AAGCCGCCTGGTCGGATTCCGATGACGAGGACCTGCAGGTGGGCGATGTC
AAGAAGGCCACAAAGCACACGGGTCCACTGAACCACCTGCGCAAGGATAA
ATCGTACAAGGAGTATCTTACGGCGCGATTCCAGCGCACGCTTAACCAAC
CCAAGTGGGCGGAAAAGAAGGTCAAAAATGAGGACGACGAGGACGTATCC
TCCGACGAAGAACTGCTGCGGACGGTTGGCTTTATCGATCGTAAAGCCCG
GAACAGTGATCTGCCCCAGAAGACTCTGTATTTTAAACGGGTCAAAGACC
TGAACAGGGCCACATATGCCGAGGGTAATGCCACCAGCATTCAGTTTCAT
CCAACCAGTACTGCTGCTCTAGTGGCGGGCATGAATGGCCTAGCCACCAT
CTACGCCGTGGATGGGCAAAAGAACGAAAGGTTGCACAACATGCGCTTCA
AGAAGTTCCCGCTGGGCGTGCTCCAGAATTGCTCCATGCGGCACAAGGGC
GTTCTTTGGTTCTGTGAAACCATTCTACTACTCCTACGACTTGCTGGAAG
CCAAGGAATCGAAGCTAAAGCTGCCGGGCGCATTGAAATTATGAACGCTT
TGAAGTGTCTCCATGTGGCAAATTATCGTCACTGCTGGCAAGTTTGGAGC
CAATCACCTGCTCACGACAAAACAAATGACCTGCTGCCAGCTCCAGCAGG
AGGCAAGTGATATCCAATGTCTAGTGACTCAGAGATCTCGCTGCGTCATC
AATGTCAGCGGCTGACCTGCCGACCTCATCAGACATTCATGGACAGGCGT
ACTGGAGTCATCCGTTCACAGCTATGGCACGCATCAAAGGCGTGTCAACT
TCA
FMO05561.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:17:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wcd-RA | 1663 | CG7989-RA | 106..1105 | 9..1003 | 4695 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:16:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16346414..16347395 | 987..9 | 4545 | 98.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:16:59 has no hits.
FMO05561.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:02:26 Download gff for
FMO05561.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wcd-RA | 102..1159 | 1..1045 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:32:51 Download gff for
FMO05561.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)k07824-RA | 100..1157 | 1..1045 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:47:43 Download gff for
FMO05561.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wcd-RA | 102..1159 | 1..1045 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:47:43 Download gff for
FMO05561.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16346342..16347399 | 1..1045 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:02:26 Download gff for
FMO05561.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12233847..12234904 | 1..1045 | 96 | | Minus |
