FMO05562.5prime Sequence
791 bp (791 high quality bases) assembled on 2008-08-25
> FMO05562.5prime
CAGTCGACATGCTGCCTACTTACGAGCGCTTCAGTGATCCCAAAAGCGTC
CTCTTCCGGCTTCCCTTTGCGCGACTGGCACTGGTGGCTCTTAGTTTGCC
CCTGGGAGGCTTCTTCTTCTGCGTGATTTGGTCTCTGACCTTTGACTTCG
TTAGGAGCACCTACACCCACTGCGATGTGACCAACTATCTGCCCTCCGTC
TCGGCGGCCATTGGGAACTATGAGCCCCAAAAAACCGTCTGGAGACTGGC
CATATTTCTGCATTTACCACTCCGTTTGGCAGTTGCCAAAATCTACTTGG
AGCACTATCGGGAACACATCCGCCGGAGCAGAAGATTGCTGGGCATCCTG
GCCTGCTTCTTGAACGTCGTGGAGGATCTGGCCCTCTTCTGCTTGTCGTT
TTGGACCTCTGCGGATCATTACGAGACCCACAGAAACGCATTTGTGGTGT
TCATTGCGTGTTCCGAGTGCTATATGCTGGTTTCCTACCTGCTGAACAGG
AATATACAGAAGACCGTGCTCTTGCCGCACGAGGAGAAGTCGCTGAGGTA
CAAGAGAAATCTGTTCTTGGTGAATGTGATCGCCTTTGGCTTGGCAGGAT
ACTGCTTCGTGAGGCACAACTCGCATTGCGAGGCGGGAGTCTATACTTTC
TTCGCGTTGTTCGAGTACATCGTGGTGCTGACCAACATGGGGTTCCACAT
GACCTCCTACTGGGACTTCTACGCCCTGAATGTGGTGTGTGATGCCAAGC
ACGGTCTCTACCTATCACAATCGGCAAGCTTTCTAGACCAT
FMO05562.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:59:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3876-RA | 1370 | CG3876-RA | 175..939 | 9..773 | 3825 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:59:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 818704..819334 | 639..9 | 3155 | 100 | Minus |
| 2L | 23513712 | 2L | 818510..818645 | 773..638 | 680 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:59:39 has no hits.
FMO05562.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:40:59 Download gff for
FMO05562.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3876-RA | 167..939 | 1..773 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:32:52 Download gff for
FMO05562.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3876-RA | 151..923 | 1..773 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:55:39 Download gff for
FMO05562.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3876-RA | 167..939 | 1..773 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:55:39 Download gff for
FMO05562.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 818510..818643 | 640..773 | 100 | <- | Minus |
| 2L | 818704..819339 | 1..639 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:40:59 Download gff for
FMO05562.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 818510..818643 | 640..773 | 100 | <- | Minus |
| arm_2L | 818704..819339 | 1..639 | 99 | | Minus |
