FMO05574.5prime Sequence
1222 bp (1005 high quality bases) assembled on 2008-08-25
> FMO05574.5prime
CAGTCGACATGCTGGATGTAGTGGCTCTACTGCTTATTGCCCTGGCAGTG
GGCTTCTGGTTCGTGCGGACGAGATATAGCTACTGGACCCGGCGGGGCAT
TGGCAGTGAGCCGGCCCGGTTTCCCGTGGGGAATATGGAGGGATTTCGGA
AAAACAAACATTTCATCGACATTGTAACGCCAATCTATGAGAAGTTCAAG
GGCAATGGAGCACCCTTTGCCGGATTTTTTATGATGTTGAGACCTGTGGT
CTTGGTCACAGATCTGGAACTGGCCAAACAGATCCTCATACAGGACTTCG
CCAACTTTGAGGATCGGGGAATGTATCACAATGAGCGGGATGATCCTCTA
ACTGGGCATCTATTCCGCATTGACGGGCCCAAGTGGCGACCCTTGCGCCA
GAAAATGTCCCCCACCTTTACCTCAGCTAAGATGAAGTATATGTTTCCGA
CGGTCTGCGAGGTGGGCGAGGAACTTACTCAAGTTTGTGGCGAGTTGGCG
GATAATGCCATGTGTGGAATCCTCGAGATCGGTGATCTGATGGCTCGCTA
CACTTCGGACGTGATAGGACGGTGTGCCTTTGGCGTGGAATGCAACGGCC
TCCGGAATCCCGAGGCGGAGTTCGCCATAATGGGCAGGAGAGCCTTTTCA
GAGCGTCGCCACTGCAAGCTGGTCGATGGATTTATAGAGAGTTTCCCCGA
AGTGGCCAGGTTTCTGCGCATGCGCCAAATCCATCAAGACATTACGGATT
TCTATGTGGGCATCGTTCGGGAAACTGTGAAGCAGAGGGAGGAGCAGGCA
TCGTGAGGAGCGACTTCATGAACCTGCTGATCGAAATGAAGCAGCGCGGT
GAGCTCACCATCGAGGAAATGGCGCCCAGGCATTTATATTCTTTGCGGCG
GGATTCGACACATCCGCATCAACGCTAGGATTTGCCCTGTACGAGTTGGC
CAGCAGCCGGCACTGCAAGCAAAGCTACGCGAGGAAATCGACCAGGCCTC
TGCGGTTACCACGTGATTCACATATGATCAATGCAGGAGCTGCGGTATGA
CTGATCATAGCAGACCCTTCGGAGTATCCATACTACGCAGCTCCCTCGAT
CTCCAGCATTCTCTAGCGACCAGGCATCTCATTCCATCGAGCGGTCAATG
CTATGATCGGTTAAGCATCCTACTGATCGCCCTATATCCGAGAACATATA
GATTCATCTCCGAGATGCCTCT
FMO05574.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:13:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp6a22-RC | 1951 | CG10240-RC | 116..1230 | 9..1106 | 5075 | 97.9 | Plus |
| Cyp6a22-RB | 1925 | CG10240-RB | 330..1444 | 9..1106 | 5075 | 97.9 | Plus |
| Cyp6a22-RA | 1711 | CG10240-RA | 116..1230 | 9..1106 | 5075 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:13:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14871803..14872805 | 9..1009 | 4805 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:13:09 has no hits.
FMO05574.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:55:15 Download gff for
FMO05574.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a22-RA | 111..1161 | 2..1047 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:33:05 Download gff for
FMO05574.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a22-RA | 107..1157 | 2..1047 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:52:54 Download gff for
FMO05574.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6a22-RA | 111..1161 | 2..1047 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:52:54 Download gff for
FMO05574.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14871798..14872848 | 2..1047 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:55:15 Download gff for
FMO05574.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10759303..10760353 | 2..1047 | 98 | == | Plus |
