FMO05584.5prime Sequence
909 bp (909 high quality bases) assembled on 2008-08-25
> FMO05584.5prime
CAGTCGACATGAGCGATGCAGAGGAAACAAAAGCAGAAGCCACCACCAAA
GTGTTGTTCAAAAAAGCCGGTCGAAAAAACCTAAGGCAACGCAAGAATTC
AGACGAAGAAGAAAAGGAGGAACAATTAACGCTAGATGAGATTAAAGAAC
GCCAGCGCCTCAGGCAGCGACCCAATGGCGTCAGCCTTGTGGGACTGGCG
CTGGGCAAGAAGATCGCGCCAGAAGAGGAGCTGGCCATCAAGGATCCCTT
TAATGTGAAGACCGGTGGTCTGGTCAACATGAAGCAGCTGAAATCGGGCA
AGATGAAGGAGGCGGACGACGCCTACGACGTGGGCATTGGCACGCAGTTC
TCGGCGGAGACGAATAAGCGGGATGAGGACGAGGAGATGATGAAGTACAT
CGAGCAGGAGCTGCAGAAGCGCAAGGGAGGCGGCACGGAGGACGCAGCAG
AGGACGACGGTGATGTAAACAAGTACCTGACCCCCGAGGATGCCGCCCTG
TACGCCCTGCCCGACCACCTGAGGCAGTCTTCCTCGCACAGATCGGAGGA
GATGTTGTCCAACCAGATGCTCAATGGCATTCCTGAAGTGGACCTGGGCA
TTGTGGCCAAGATCCGCAACATAGAGGCCACCGAGGAAGCCAAGCAGAAG
CTGCTGCAGGACGCCAAGAACAAGAAGGACGGACCCTCGCAATTCGTGCC
CACCAACATGGCGGTGAACTTCATGCAACACAATCGATTCAACATCGAGG
ACAACAGCGATCAAAGGAGGCGCAAGCGTGAGGAAAGGGAGGGCAACAAA
TCCGCACAGCATCAGACGAATCCCAATGGAGTCAAGCGAGCCACAGATGA
CTACCATTATGATAAGTTTAGGAAGCAGTTCCGCAGATACGCAAGCTTTT
CTAGACCAT
FMO05584.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:40:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7974-RB | 1348 | CG7974-RB | 113..995 | 8..890 | 4415 | 100 | Plus |
| CG7974-RA | 1137 | CG7974-RA | 113..995 | 8..890 | 4415 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:40:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1665421..1666034 | 125..738 | 3070 | 100 | Plus |
| 3L | 28110227 | 3L | 1666090..1666241 | 739..890 | 760 | 100 | Plus |
| 3L | 28110227 | 3L | 1665250..1665366 | 8..124 | 585 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:40:44 has no hits.
FMO05584.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:16:48 Download gff for
FMO05584.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7974-RA | 113..1000 | 8..895 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:33:03 Download gff for
FMO05584.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7974-RA | 108..995 | 8..895 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:32:37 Download gff for
FMO05584.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7974-RA | 113..1000 | 8..895 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:32:37 Download gff for
FMO05584.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1665250..1665366 | 8..124 | 100 | -> | Plus |
| 3L | 1665421..1666034 | 125..738 | 100 | -> | Plus |
| 3L | 1666090..1666246 | 739..895 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:16:48 Download gff for
FMO05584.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1665250..1665366 | 8..124 | 100 | -> | Plus |
| arm_3L | 1665421..1666034 | 125..738 | 100 | -> | Plus |
| arm_3L | 1666090..1666246 | 739..895 | 98 | | Plus |
