FMO05593.5prime Sequence
1224 bp (957 high quality bases) assembled on 2008-08-25
> FMO05593.5prime
CAGTCGACATGTCGGCGCAGCGTCTAAATGCAGCGGAACGGGATTTGGAG
AAGTTCATCAAGTTCCTGGTCTTGAAGTCCACCCAGGTGGTGGTGCAGTC
CCGACTGGGCGAGAAGATGCAGACACAGTGCAATCCACTGGCGGGCAGTG
ATTGGTTTAACATAGCCGTGCAGGATCATCCGGAGGTCCTGGACGAGACC
AAGCGGGCTCTGAACCTAAAGACAGGAGAGAGCATTCTGCAGCGCCTGCC
GTTGTGCGTGGAAATATCCCTGAAAACGACTGAGGGTGACCAGATGGTGT
TGGAGGTGTGGTCCCTAGACCTGCTCCAGCCCCAGAATGGTGCCTCCCCG
GCCACCAATGACCTGAACCCCGAAGGCCAGACCCTAAAGGCAGCCCACGC
CATCTACAATCGCATGGGCATCATGCTCAAGTCCCTCATATCGCTGACCC
GCACCACGCCCGCCTACAAATTATCCCGGCGCCAGTGCCCCGACTCGTAT
GGCATCTTCTACAGGATCTACGTGGACAGGCCGCAGGTCCACACCCTGGG
CGAGGGTCACAAGCACGTAAAGATCGGACAACTCAGCACGATTGTTGGCT
CGCTGGTCATGTCCGTGGCCTACCGCACAAAGCTGACCATTTCGCCCACG
GCTGCCCAGTCAGAGAGCAACACCATAATGCTGAAGTCGGATCACTTTAG
ACCCGCCACGGATGCCAATACACCTGGCAACCAGCAGCAGACTCAAAATG
GCACTGTCGTGGCCAAGATACTGGGCTTGGGTGCCCTAAATCCCGCCCAG
GGTACAGCCGATCGGCGGTTTATCGATATAGAGAAGCCGTTGCGACCGGG
CGCCTTCACAGATATGGGCAAACTAAAGCAGTTACACTGAAGATGACTTT
GTGTTGCCGGAAACCCCGCCTTTCGAGGTGATTTTTGGCGAGGACGCGGC
TTCTGTGGAGTCCTCAATCGACTGGATACAATTCGGTCGCAGTGTTAACT
CAGTATAACTACATAGTACGCAGGATAGTAATTCAACAGATCAGCATCTA
ACACAGCTCGGCAGCTTCAAGAGTTCAAGAAAAACCGAAGTCAGTATCGC
CATAAAAACCTGCTGATCCGCCAGGCCCCAAGCCCAATTCGTCCATCGAG
CTTCTAACCAGAGTGCCGGGGAGAAGAGAATACTCGCAAAAGAGCCTTCA
CATTCTCTCTTGTGCTTGCTCAGC
FMO05593.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:30:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Atg13-RA | 3003 | CG7331-RA | 320..1445 | 9..1119 | 4930 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:30:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8350134..8351113 | 9..990 | 4580 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:30:40 has no hits.
FMO05593.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:57 Download gff for
FMO05593.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Atg13-RA | 313..1447 | 1..1122 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:33:21 Download gff for
FMO05593.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7331-RA | 309..1443 | 1..1122 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:18:08 Download gff for
FMO05593.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Atg13-RA | 313..1447 | 1..1122 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:18:08 Download gff for
FMO05593.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8350127..8351261 | 1..1122 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:57 Download gff for
FMO05593.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4175849..4176983 | 1..1122 | 96 | | Plus |
