FMO05602.5prime Sequence
972 bp (923 high quality bases) assembled on 2008-08-25
> FMO05602.5prime
AACAAAGTTATCAGTCGACATGGATAACATAGTCTACGACTTTGCCAAGA
TCACGTTTCAAGCAAAAGACAACAGGTCACCCACTACTAACTCGAATCTG
TCGTGGCAACTAAATCAGATGGCCTTGTCGGACATGGAGGAGATGCAGGA
CACATCCGAGCCCATAGCTCCACCCGAATCCGATGACAATGTCAGCAGTG
AATCGCATGACTCCGACGATGTAGACTCGCAATTGAGTCGCTGCGAGGAC
AACGATGACGACAGCGATTGCATCAGTGGATCCTCCAGACGCAGTTCCAC
TTTTGGAGCTCGAGCGGGCGTGGCTCGTCGCAGAATGCCCGCCAGGGTGT
CCAAGGACAACTTTAACCGGATCTGCAGCGCCATCATGAAACCCATCAAA
AAGAAGCAACGCAAAGAACTGAACACAAATGCCCAAACACTTAAAAGCAT
CGAAAAGATCTACACCAGCAGGCGCATGAAAAAGTTCACGCCCACCAATC
TGGAGACAATCTTCGAGGAACCCAGCGATGAGAATGCCGCCGATGCAGAG
GACGACAGCGAAGAGTGCTCCATCAGCAGCCAAGTGAAAGTAGTTAAGGT
GTGGGGTCGCAAACTCCGCCGGGCAATATCCTTCAGCGATGGCCTGAACA
AGAACAAAATCCTGTCGAAGAGACGCCGCCAGAAGGTGAAGAAGACCTTT
GGCAAGCGTTTCGCACTCAAGAAAATCTCCATGACCGAGTTCCACGATCG
TCTGAATAGAGCTTCGACAGTGCCATGCTGGAGGGGGATGATGCAGAGGC
GGGAGGATCGGCGGAGCCGTCAACATCCCCAAGACATCCATGACATGGAA
GACATACAGCTGCCGACAATGAGCAGCCAGCACCAGTTCCTCATGCAACC
GGCGGCTTTGAGGCAAGCTTTCTAGACATTCGTTTGGCGCGCGGGGCCAG
TTAGTGGTCATAATCAAATCAT
FMO05602.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:09:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
tan-RB | 1657 | CG6586-RB | 316..1212 | 20..912 | 4385 | 99.6 | Plus |
tan-RA | 1494 | CG6586-RA | 316..1212 | 20..912 | 4385 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:09:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 6055714..6056549 | 73..905 | 4030 | 99.6 | Plus |
3L | 28110227 | 3L | 6055608..6055665 | 20..77 | 290 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:09:14 has no hits.
FMO05602.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:28:08 Download gff for
FMO05602.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tan-RA | 316..1212 | 20..912 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:33:25 Download gff for
FMO05602.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tan-RA | 274..1170 | 20..912 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:50:41 Download gff for
FMO05602.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tan-RA | 316..1212 | 20..912 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:50:41 Download gff for
FMO05602.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 6055608..6055663 | 20..75 | 100 | -> | Plus |
3L | 6055717..6056550 | 76..906 | 99 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:28:08 Download gff for
FMO05602.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 6048708..6048763 | 20..75 | 100 | -> | Plus |
arm_3L | 6048817..6049650 | 76..906 | 99 | <- | Plus |