FMO05608.5prime Sequence
1246 bp (991 high quality bases) assembled on 2008-08-25
> FMO05608.5prime
CAGTCGACATGAAGCCTTTCGAAGTGCCGCCCTGGGAGGAAGGAGCCGAT
ATCATTGAGTTTGAGCCGGTAAATCCTTCAGGAAATGGAGTTGCCGCCAA
GAAGAAACCAAAGAAGAAGAAACCCAAAAAGAAGAAGGCCGCTGTGCCAA
ATGAAAATCTGAATGTGAACAAGGCAGCTGAAAAATTCACTTACCGGCAG
GGCAGAGGACCTCTTGCCCCGCCCCAAGACTCCTCGGATGATGACTACGA
AGATGTGGAGGATGGCATCCGGGCCATGCACAAGGTGAAGTCCGGAAGAA
TAGAGAAACAGCGACCACCAACGCAGGCCACAAAAGGTGGCAAAAAAGAA
CTGAAACTGAAACCCGAACTGGCCCAGGCGGCTTTGGAGGCCATGGAGGC
CACCAGCTCAACCACGCCGGCTGCAAACTCGTTGGCCAGTAAGCTGCAAT
CGGAACTCCTGGGCGGACGTTTCCGATACATCAACGAGCAGCTCTACTCG
ACGACCAGTCGCAAGGCGGAGGCACTTTTCCGCAAGGATAGCTCCGCCTT
CGAGGCCTATCACGCTGGCTACCGCCAGCAGGTGGAGAAGTGGCCCATCA
ATCCGCTTAATCGCATCATCAAGACCATCAAGAAGATTCCCAAAACAGCC
ATAATTGGCGACTTTGGTTGCGGCGAGGGCAAATTGGCACAATCCGTGCC
CAACAAGGTGTACTCCATGGACTTGGTCGCTGCTCGTAGCGACATCATTG
CCTGCACATCACGGATACTCCACTCCAAGCTCGAACTCTGGACGTGGCCG
TATACTGCCTCTCACTAATGGGCACGGATCTGAACGAGTTTCTTCTTGGA
GGCCAATCGAGTGCTTCAAGCTGCACGGCACTGTCTATATCGGCGGAGAT
TCAGTCGCCGATTCCAGGATGTGGCGGGAAGTTTGTGCGTTGCCTCAATG
CATGTGGATTTCGATCTTAAACAAGAGGAGGGGCTGTTAACTTTTCCTAC
TTCTTCCAATTCAAGAAAGATGCGGTCATGTGCCAGAAACACCAAGAATG
AAAGGCTTTCTCCTTCAAACTTGCTTAAATCGCAGGGGAAGCAAGCTTTC
TAAACATCCGTTTGGGGCGGCCGGTCCAGGTAATTGTCATATTCTATCTA
TCATATTCTAATCCACACTGACCTAGGATCTGTGCCTTGTACTATGGCGT
GGATCCTACAATAATAAAACGGCCGGCGTCGGTCCACACGCATCAG
FMO05608.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:08:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7137-RA | 1270 | CG7137-RA | 63..1131 | 9..1084 | 4845 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:08:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19227406..19228409 | 9..1017 | 4490 | 98.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:08:23 has no hits.
FMO05608.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:56:05 Download gff for
FMO05608.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7137-RA | 56..1136 | 1..1089 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:33:32 Download gff for
FMO05608.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7137-RA | 70..1150 | 1..1089 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:42:46 Download gff for
FMO05608.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7137-RA | 56..1136 | 1..1089 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:42:46 Download gff for
FMO05608.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19227399..19228463 | 1..1073 | 97 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:56:05 Download gff for
FMO05608.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15114904..15115968 | 1..1073 | 97 | <- | Plus |
