FMO05614.5prime Sequence
1223 bp (988 high quality bases) assembled on 2008-08-25
> FMO05614.5prime
CAGTCGACATGTCGCTGAATCCCAACGGGTATAAACTGTCCGAGAGGACG
GGCAAACTGACGGCATATGATCTCATGCCCACAACAGTGACCGCTGGACC
GGAGACACGGGAGTTCCTGCTGAAGGTAATCGATGTGCTGCTGGACTTTG
TGAAGGCCACCAACGACCGGAACGAGAAGGTTCTGGACTTCCACCATCCC
GAGGACATGAAGCGGCTGCTCGATCTGGATGTGCCCGATCGCGCCTTGCC
ACTGCAGCAGCTCATCGAGGACTGTGCCACCACATTGAAGTACCAAGTTA
AGACGGGACATCCCCACTTCTTCAATCAGCTGTCCAACGGTCTGGACCTG
ATCTCCATGGCGGGTGAGTGGCTGACGGCCACTGCGAACACCAACATGTT
CACCTACGAGATTGCACCAGTTTTCATTCTCATGGAGAATGTGGTGCTGA
CCAAGATGCGTGAGATCATTGGCTGGTCGGGTGGCGATTCCATTTTGGCA
CCCGGAGGTTCCATCTCCAATCTGTATGCCTTCCTGGCAGCTCGTCACAA
GATGTTCCCGAACTACAAGGAGCACGGCTCGGTGGGATTGCCCGGCACAC
TGGTGATGTTCACCTCGGATCAGTGCCATTACTCGATCAAATCATGCGCT
GCCGTTTGTGGACTGGGCACCGATCACTGCATTGTGGTGCCATCGGATGA
GCACGGCAAGATGATCACCTCGGAGCTGGAGCGCCTGATCCTGGAGCGCA
AGGCCAAGGGTGACATTCCATTCTTTGTGAACGCCACTGCCGGCACCACT
GTGCTGGGTGCCTTCAATGATATCAACACGATTGCGGATATCTGCCAAAA
TACAACTGCTGGATGCACATCGATGCTGCTTGGGGCGGTGGATTGTTGAT
GTCGCGTAAGCATCGTCATCCAGATTTACTGGTGTGAGCGTGCCGATTCG
GTCACCTGAAATCCCCACAAGCTCATGGGAGCCCTGCTCAGTGCTCCACG
ATCCATTTCAAGAAGAATGGCCTGTCATCAGCTGCATCGATGTCGGCGGA
GTATTCTTCATGACCGACAAGCAGTAATGACTTAGCTACGAACCTGGCGA
CAGGTGAATCCAGTGCGGCCGCCACACGACATCTTCAACTGTGATCGTGG
GGTAGCCTAAGCTCGACAAACGACCGGCTAGGAACTGCCGCATCAATTGG
AAGACCATCTCGAGAAGATCGAG
FMO05614.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:55:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Gad1-RD | 3017 | CG14994-RD | 197..1341 | 9..1143 | 5265 | 98.2 | Plus |
Gad1-RC | 3151 | CG14994-RC | 331..1475 | 9..1143 | 5265 | 98.2 | Plus |
Gad1-RA | 3050 | CG14994-RA | 230..1374 | 9..1143 | 5265 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:55:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 4078925..4079495 | 875..306 | 2775 | 99.5 | Minus |
3L | 28110227 | 3L | 4082402..4082640 | 307..69 | 1195 | 100 | Minus |
3L | 28110227 | 3L | 4076798..4076878 | 1019..940 | 310 | 95.1 | Minus |
3L | 28110227 | 3L | 4084730..4084790 | 69..9 | 305 | 100 | Minus |
3L | 28110227 | 3L | 4078756..4078817 | 935..875 | 260 | 98.4 | Minus |
3L | 28110227 | 3L | 4075816..4075917 | 1138..1039 | 230 | 86.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:55:51 has no hits.
FMO05614.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:46:08 Download gff for
FMO05614.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Gad1-RA | 222..1374 | 2..1143 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:33:40 Download gff for
FMO05614.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Gad1-RC | 307..1459 | 2..1143 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:31:13 Download gff for
FMO05614.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Gad1-RA | 222..1374 | 2..1143 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:31:13 Download gff for
FMO05614.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4075810..4075940 | 1019..1143 | 91 | <- | Minus |
3L | 4076799..4076877 | 941..1018 | 94 | <- | Minus |
3L | 4078750..4078817 | 875..940 | 97 | <- | Minus |
3L | 4078926..4079494 | 307..874 | 99 | <- | Minus |
3L | 4082403..4082639 | 70..306 | 100 | <- | Minus |
3L | 4084730..4084795 | 2..69 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:46:08 Download gff for
FMO05614.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 4075810..4075940 | 1019..1143 | 91 | <- | Minus |
arm_3L | 4076799..4076877 | 941..1018 | 94 | <- | Minus |
arm_3L | 4078750..4078817 | 875..940 | 97 | <- | Minus |
arm_3L | 4078926..4079494 | 307..874 | 99 | <- | Minus |
arm_3L | 4082403..4082639 | 70..306 | 100 | <- | Minus |
arm_3L | 4084730..4084795 | 2..69 | 94 | | Minus |