FMO05616.5prime Sequence
1242 bp (623 high quality bases) assembled on 2008-08-25
> FMO05616.5prime
CAGTCGACATGCGCATCAAGATGGATTGCGAAGTGCAGGAGCAACACAAA
CAGCAGCAACAACAACAGCAGGTCCACCAGCAACAACAAAAACACGGCAG
CAGCAACAAGTTGCCAGTGAGAAAGCAGGAAAGCTGCTCCGACGACGATG
AGAGCCAGAGTCCCAGCCGCACAACGGAGCGCCAGAACCTGGAGTTCGCC
AAAAAGCTAGGCTACAGCGAACAGTCCATCCATTCGGCGCTGACGCGCCT
CGGCTCGGAAGCCAAGCAGAACGAGCTGCTGGCGGAGCTGATCAAGCTGA
CGGCCGATGCACCGCGGCCCGCCCACATAGGCGGAGGCGGCAGTCCATCC
AGCATGACCAGCACTCTGTCCTCCCCGACCGGCGGTAGCAACAGCTCTGG
CTTGAGACACATCGTAATCAATGGCAGTAATGTCGCCCTTTCTCACGGCA
ACAATCTAGTATTCTCTTGCCGCGGCTTTCGCATCTGTGTGGACTGGTTC
CGGCAGCGTGGCCATCGCGACATCACCGCTTTCGTGCCCAACTGGCGCAA
GGAGATGGCGAACAACAACATAGCCGACCAGGAGCTGCTCTACGAGCTGG
AGCACGAAAAGATACCTGGTGTTCACGCCATCGCGACATCTAGATGGCAA
GCGTGTGTCCTGCTACGATGATCGCTTCATACTCAGCTGGCAGTGGAAAC
TGACGGCATTGTATTCTCCAACGACAACTACAGGGATCTGATCCAGGGAG
AGTACGAGTTTAGGCGCGTGGTGCAGGAGCGCCTGTTGATGTACTCTTTT
GTAATGACATCTTCATGCCACCCGACGATTCCTTGGGTGATCGGGTCCAA
ATCTGGACCTCTTCCTGTGCTCCCAAAGCATAGAAAATGGCGGATGCGCC
ATCAGTTGTGTCCTGTACGACAGAAGAGCTCTACAGCAATATTGGCAAGT
CCGGAATACAAATCAGGCGCTACTGCTGCACGCCTCCGCTGCAGTCTTCC
AAACGCGCCCTGCCAACTAACGATGCCAACATTGATCAATCGGAGGGCAT
ATAACATTTAGATCAATATGAAATACCGGAGACCCTGGTCGACCCAATCC
ATATCCATCACAGGTAGTCAGCCTCTCTCCCTTCAAATTGATCTTTCAGG
GCCTGGTATCCGCAGGCAATCCACGAACGTGCAAGCCATAAACGGCGTCT
CGCTAGCGATGTGGGCCCCACCTGACAGTCCTCCCCCTCCCG
FMO05616.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:35:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10889-RA | 2176 | CG10889-RA | 139..1131 | 9..994 | 4205 | 95.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:35:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20035011..20035918 | 913..9 | 3915 | 97.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:35:06 has no hits.
FMO05616.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:37:26 Download gff for
FMO05616.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10889-RA | 131..1115 | 1..981 | 95 | <- | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:33:42 Download gff for
FMO05616.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10889-RA | 131..1115 | 1..981 | 95 | <- | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:08:18 Download gff for
FMO05616.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10889-RA | 132..1116 | 1..981 | 95 | <- | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:08:18 Download gff for
FMO05616.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20034941..20035925 | 1..981 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:37:26 Download gff for
FMO05616.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 15860663..15861647 | 1..981 | 95 | | Minus |
